Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3379g00019 ATGGATGAGGATTTCGATATGCCCCCGCCGGAGGAGATGAGCGAGGACTTCGATCTTCCTGATGACAGCATCACTCTTAAGGTTGGGGAGGAGAAGGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTGGTCAAGGAAGGTGAAGGCTGGGACACACCTGAGGTGGGCGATGAAGTTGAAGTTCATTACACGGGAACGCTGCTTGATGGGACCAAGTTTGATTCAAGCCGCGACAGGGGAACCCCCTTTAAGTTTACGCTCGGACAAGGACAAGTAATTAAAGGGTGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCTGTTTTCACCATCCCTGCTGAGCTAGCATATGGTGAATCTGGTTCTCCTCCAACCATTCCTCCTAATGCTACACTTCAGTTTGATGTTGAGCTTCTGTCTTGGACCAGCGTGAAGGACATATGTAAGGATGGTGGCATATTTAAGAAAATCCTTACTGAAGGAGAGAAATGGGAGAACCCAAAAGATCCTGATGAAGTTTTAGTCAAATATGAAGCTCGGCTTGAAGATGGAACGCTTGTATCAAAATCTGATGGAGTAGAGTTTACAGTGAAAGAGGGTTTTTTTTGTCCTGCCTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTCTTAACTGTGAAGCCACAATATGGTTTTGGTGAGAAGGGTAAAGCAGCACATGGGGATGAAGGTGCTGTTCCACCCAATGCATCCTTACAGATAACTCTTGAATTGGTATCTTGGAAGACTGTTTCAGAAGTTACTGATGATAAGAAGGTCATTAAGAAAATCCTCAGTGAAGGGGAAGGATACGAGCGTCCAAATGAAGGAGCTGTTGTGAAAGTGAAATTGATTGGCAAACTGCAAGATGGCACTGTCTTCTTGAAGAAGGGCCATGATGAAGAGCTGTTTGAGTTCCAAACAGATGAAGAGCAAGTGATTGATGGACTTGATAGAGCAGTGTTGACTATGAAGAAGGGTGAAGTAGCATTGTTGACTATTGCACCTGAGTATGCCTTTGGTTCATCTGAGTCCAAGCAAGAATTGGCCGTTGTTCCTCCCAACTCAACTGTTTACTATGAAGTTGAACTAGTATCATTTGTGAAGGAGAAAGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGCGCTGTTAAGAAGAAAGAAGAAGGAAATGTGTTGTTTAAGAGTGGAAAGTATGCTAAAGCTGCTAAAAGATATGAGAAGGCTGCCAAGTACATAGAGTATGATTCCTCCTTCAGTGAAGAGGAGAAGAAGCAAGCCAAGGCACTGAAGGTTGCTTGCAATCTGAACAATGCGGCATGCAAGTTGAAATTGAAAAATTATAAAGAAGCTGAGAGATTGTGTACCAAGGTTCTGGATCTTGAAAGCAGCAATGTGAAGGCACTTTATAGAAGAGCACAAGCTTATATCGAGTTGACTGACTTGGACTTGGCAGAACTTGATATTAAGAAAGCTCTCGAGATAGACCCTGACAACAGGGATGTGAAGCTGGAGTACAAGACTTTGAAGGAAAAGGTGAAGGAGTACAACAGAAAAGAGGCTAAATTTTATGGAAATATGTTCGCCAAGATGAGTAAGCCGGATTCAAATGACAGTAATAAACAAGCGAGCAAGGATGCTGAGCCTATGAGCATTGACAGCAAAGCATAA 1713 0.4343 MDEDFDMPPPEEMSEDFDLPDDSITLKVGEEKEIGKQGLKKKLVKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAVFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILTEGEKWENPKDPDEVLVKYEARLEDGTLVSKSDGVEFTVKEGFFCPAFAKAVKTMKKGEKVLLTVKPQYGFGEKGKAAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILSEGEGYERPNEGAVVKVKLIGKLQDGTVFLKKGHDEELFEFQTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEGAVKKKEEGNVLFKSGKYAKAAKRYEKAAKYIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKNYKEAERLCTKVLDLESSNVKALYRRAQAYIELTDLDLAELDIKKALEIDPDNRDVKLEYKTLKEKVKEYNRKEAKFYGNMFAKMSKPDSNDSNKQASKDAEPMSIDSKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3379g00019 570 MobiDBLite consensus disorder prediction 546 561 - -
Pral3379g00019 570 Gene3D - 29 146 IPR046357 GO:0003755
Pral3379g00019 570 SUPERFAMILY FKBP-like 266 399 - -
Pral3379g00019 570 FunFam Peptidylprolyl isomerase 29 147 - -
Pral3379g00019 570 Gene3D - 262 382 IPR046357 GO:0003755
Pral3379g00019 570 MobiDBLite consensus disorder prediction 1 19 - -
Pral3379g00019 570 Gene3D - 147 261 IPR046357 GO:0003755
Pral3379g00019 570 MobiDBLite consensus disorder prediction 543 570 - -
Pral3379g00019 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Pral3379g00019 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 377 IPR001179 GO:0003755
Pral3379g00019 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 257 IPR001179 GO:0003755
Pral3379g00019 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Pral3379g00019 570 SMART tpr_5 397 430 IPR019734 GO:0005515
Pral3379g00019 570 SMART tpr_5 446 479 IPR019734 GO:0005515
Pral3379g00019 570 SMART tpr_5 480 513 IPR019734 GO:0005515
Pral3379g00019 570 FunFam Peptidylprolyl isomerase 262 382 - -
Pral3379g00019 570 SUPERFAMILY TPR-like 385 545 IPR011990 GO:0005515
Pral3379g00019 570 FunFam Peptidylprolyl isomerase 385 540 - -
Pral3379g00019 570 PANTHER PEPTIDYLPROLYL ISOMERASE 10 145 - -
Pral3379g00019 570 SUPERFAMILY FKBP-like 148 264 - -
Pral3379g00019 570 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Pral3379g00019 570 Gene3D Tetratricopeptide repeat domain 383 540 IPR011990 GO:0005515
Pral3379g00019 570 FunFam Peptidylprolyl isomerase 148 261 - -
Pral3379g00019 570 MobiDBLite consensus disorder prediction 1 21 - -
Pral3379g00019 570 Coils Coil 513 533 - -
Pral3379g00019 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 380 IPR001179 GO:0003755
Pral3379g00019 570 Pfam Tetratricopeptide repeat 481 513 IPR013105 -
Pral3379g00019 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Pral3379g00019 570 SUPERFAMILY FKBP-like 33 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3379g00019 Pral-Chr3379 204615 209536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3379g00019 1 545 Calmodulin-binding Proteins AT3G25230 81.603 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3379g00019 K09571 - cpap:110821762 981.089