Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3379g00018 ATGAAGAAGGGTGAAGTAGCATTGTTGACTATTGCACCTGAGTATGCCTTTGGTTCATCTGAGTCCAAGCAAGAATTGGCCGTTGTTCCTCCCAACTCAACTGTTTACTATGAAGTTGAACTAGTATCATTTGTGAAGGAGAAAGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGCGCTGTTAAGAAGAAAGAAGAAGGAAATGTGTTGTTTAAGAGTGGAAAGTATGCTAAAGCTGCTAAAAGATATGAGAAGGCTGCCAAGTACATAGAGTATGATTCCTCCTTCAGTGAAGAGGAGAAGAAGCAAGCCAAGGCACTGAAGGTTGCTTGCAATCTGAACAATGCGGCATGCAAGTTGAAATTGAAAAATTATAAAGAAGCTGAGAGATTGTGTACCAAGGTTCTGGATCTTGAAAGCAGCAATGTGAAGGCACTTTATAGAAGAGCACAAGCTTATATCGAGTTGACTGACTTGGACTTGGCAGAACTTGATATTAAGAAAGCTCTCGAGATAGACCCTGACAACAGGGATGTGAAGCTGGAGTACAAGACTTTGAAGGAAAAGGTGAAGGAGTACAACAGAAAAGAGGCTAAATTTTATGGAAATATGTTCGCCAAGATGAGTAAGCCGGATTCAAATGACAGTAATAAACAAGCGAGCAAGGATGCTGAGCCTATGAGCATTGACAGCAAAGCATAA 708 0.411 MKKGEVALLTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEGAVKKKEEGNVLFKSGKYAKAAKRYEKAAKYIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKNYKEAERLCTKVLDLESSNVKALYRRAQAYIELTDLDLAELDIKKALEIDPDNRDVKLEYKTLKEKVKEYNRKEAKFYGNMFAKMSKPDSNDSNKQASKDAEPMSIDSKA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3379g00018 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 42 IPR001179 GO:0003755
Pral3379g00018 235 Pfam Tetratricopeptide repeat 146 178 IPR013105 -
Pral3379g00018 235 Coils Coil 178 198 - -
Pral3379g00018 235 Gene3D Tetratricopeptide repeat domain 51 205 IPR011990 GO:0005515
Pral3379g00018 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 45 IPR001179 GO:0003755
Pral3379g00018 235 MobiDBLite consensus disorder prediction 211 226 - -
Pral3379g00018 235 ProSiteProfiles TPR repeat profile. 145 178 IPR019734 GO:0005515
Pral3379g00018 235 PANTHER PEPTIDYLPROLYL ISOMERASE 1 229 - -
Pral3379g00018 235 SUPERFAMILY FKBP-like 1 64 - -
Pral3379g00018 235 SMART tpr_5 62 95 IPR019734 GO:0005515
Pral3379g00018 235 SMART tpr_5 145 178 IPR019734 GO:0005515
Pral3379g00018 235 SMART tpr_5 111 144 IPR019734 GO:0005515
Pral3379g00018 235 FunFam Peptidylprolyl isomerase 50 205 - -
Pral3379g00018 235 SUPERFAMILY TPR-like 50 211 IPR011990 GO:0005515
Pral3379g00018 235 Gene3D - 1 50 IPR046357 GO:0003755
Pral3379g00018 235 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3379g00018 Pral-Chr3379 204615 212589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3379g00018 1 44 Calmodulin-binding Proteins AT5G48570 45.455 1.10e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3379g00018 K09571 - pop:7459502 390.578