Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3373g00014 ATGGGGTTGGTTTTCGATGCTTTGCCTGTGATGAGGATTCTTGTTCTTTTTCTACTGCAACTGAGTTGGCGGGTCAACTCGGAGCCGACTCAGGACAAGGAAGCTTTACTCGCCTTCATCTCCCGAACTCCGCACGCAAATCGGGTCCAGTGGAACGATTCCGACTCGGCCTGCGACTGGTTTGGGGTTCAATGCGACTCTTCGCGTTCTTTTGTGTATTCTCTTCGGCTTCCCGGCGTCGGCCTTGTGGGTCCCATCCCGCCTGACACCATCGGTCGGCTCACTCGACTTCGCGTGCTCAGTCTCCGGTCTAATGGCCTCTCCAGTGAGATCCCCTTGGATTTCTCCAATTTGACTTTACTTCGTAGCCTCTACCTCCAGGGCAACAAGCTCTCCGGTGAGTTTCCCGCCACGGTGACTCGGTTGACTCGTTTGGCGCGTCTGGACCTTTCGTACAACAACTTCACGGGTTCAATTCCTTTCTCAATCAACAATTTGACCCACCTGAGTGGTCTTTTCTTGGAAAACAATAGATTCTCTGGGAATCTGCCAAGCATTACCGCCAAATTGGTGAGCTTCAATGTGTCCCATAATCAGCTTAATGGTTCAATACCCGAAACCCTCTCGAAATTCCCCGAATCCTCATTTACCGGAAACCTCGCTCTCTGTGGAGCCCCATTACAATCTTGTAACCCATTCTTTCCGGCGCCGGCGCCTTCCGCCGTCGTACCCTCGATTCCTGTTAACGTAAAAAACTCCAGGAAGCTCTCCACAGGAGCCATTATCGGAATTTCAGTTGGATGTGCTCTTGCTTTCTTACTGCTATTATTCCTTCTCTTGCTCTGCCTGCGCAGGCGCCGGCGCCAGCAACCACAGAAGACGCCGAAGCCTGTTGCAACAGAAACGCTGGCTGCTCCGGCGCCGGAGGCGGGAACGTCATCGTCGAAAGACGATGTAACAGGTGGGTCTGCTGAGGCAGAGAGGAACAAACTGGTGTTCTTCGAAGGTGGGATTTATAGTTTCGATTTAGAAGATTTGCTGAGAGCTTCTGCGGAAGTTCTGGGGAAGGGAAGCTTCGGGACATCGTATAAGGCGGTGCTTGAGGAGGGAGCGACGGTGGTGGTGAAGAGACTAAAGGACGTGACGGTGATGAAGAAGGAGTTCGAGACACAAATGGAGATTCTGGGGAAGATTAAGCATCAGAATGTGGCTCCTCTCAGAGCATTTTACTTCTCCAAAGATGAGAAATTGCTCGTTTACGATTACATGCCTGCTGGTAGCTTGGCTGCGCTGCTTCACGGAAGTAGAGGGTCAGGGAGAACCCCACTGGACTGGGATAGCCGGATAAGAATAGCGAGAGGAGCTGCCAGAGGGTTGGCCTACGTACACGTGTCAGCAAACACGATCCACGGCACCATAAAATCTTCCAACATCCTCCTCCGAGATGACCAAGAGGCTTGCGTTTCGGAATTCGGGCTGAACCCACTATTCGGATCGACGCTCCCGTCAAATCGTGTCGGGGGTTATCGGGCACCTGAGGTCATCGAAACCCGAAAAACGACATTCCAATCCGACGTATACAGTTTCGGCGTGCTGTTGCTGGAGCTCCTAACCGGTAAGGCTCCGAACCAAGCATCTCTGGGTGAGGAAGGCATTGACCTTCCGAGGTGGGTCCAGTCGGTGGTTCGGGAGGAATGGACGGCTGAAGTGTTCGACACCGAGCTGACGAGGCACCTCAACGTCGAGGAAGAGATGGTTCAGCTCTTGCAAATAGCAATGGCTTGTGTCTCCGTCGTGCCGGATCAGAGACCCGCTATGCCTGAAGTGGTTCGTATGATCGAGGATATGAACCGTGGCGAGACTGACAATGCCTTACGACAGTCTTCCGATGATCCCTCCAAAGGCTCCGACGGTCGTACGCCGCCTCCTGAGTCGCGGACAGCTACTCCTTCTAGCACACCTTAA 1965 0.5313 MGLVFDALPVMRILVLFLLQLSWRVNSEPTQDKEALLAFISRTPHANRVQWNDSDSACDWFGVQCDSSRSFVYSLRLPGVGLVGPIPPDTIGRLTRLRVLSLRSNGLSSEIPLDFSNLTLLRSLYLQGNKLSGEFPATVTRLTRLARLDLSYNNFTGSIPFSINNLTHLSGLFLENNRFSGNLPSITAKLVSFNVSHNQLNGSIPETLSKFPESSFTGNLALCGAPLQSCNPFFPAPAPSAVVPSIPVNVKNSRKLSTGAIIGISVGCALAFLLLLFLLLLCLRRRRRQQPQKTPKPVATETLAAPAPEAGTSSSKDDVTGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSFGTSYKAVLEEGATVVVKRLKDVTVMKKEFETQMEILGKIKHQNVAPLRAFYFSKDEKLLVYDYMPAGSLAALLHGSRGSGRTPLDWDSRIRIARGAARGLAYVHVSANTIHGTIKSSNILLRDDQEACVSEFGLNPLFGSTLPSNRVGGYRAPEVIETRKTTFQSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDTELTRHLNVEEEMVQLLQIAMACVSVVPDQRPAMPEVVRMIEDMNRGETDNALRQSSDDPSKGSDGRTPPPESRTATPSSTP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3373g00014 654 Pfam Leucine rich repeat 86 131 IPR001611 GO:0005515
Pral3373g00014 654 MobiDBLite consensus disorder prediction 628 654 - -
Pral3373g00014 654 PANTHER OS05G0588300 PROTEIN 12 626 - -
Pral3373g00014 654 SUPERFAMILY L domain-like 53 221 - -
Pral3373g00014 654 CDD STKc_IRAK 354 616 - -
Pral3373g00014 654 SUPERFAMILY Protein kinase-like (PK-like) 352 613 IPR011009 -
Pral3373g00014 654 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Pral3373g00014 654 ProSiteProfiles Protein kinase domain profile. 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3373g00014 654 FunFam pollen receptor-like kinase 1 317 422 - -
Pral3373g00014 654 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Pral3373g00014 654 Pfam Protein kinase domain 351 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3373g00014 654 Gene3D Phosphorylase Kinase; domain 1 315 422 - -
Pral3373g00014 654 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Pral3373g00014 654 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Pral3373g00014 654 MobiDBLite consensus disorder prediction 615 654 - -
Pral3373g00014 654 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 628 - -
Pral3373g00014 654 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Pral3373g00014 654 MobiDBLite consensus disorder prediction 290 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3373g00014 Pral-Chr3373 830153 835138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3373g00014 32 637 Receptor kinase-like Gene Family AT5G58300 52.435 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3373g00014 Pkinase 5.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3373g00014 - - qsa:O6P43_023032 922.924