Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral336g00002 ATGGATATGGAATCTGAGAGGCTTCACAGTGCTGAGAACAGTGAACAAGGTTTAGAAAAGGACGATGTCCTCAAGAGAAGAATCTCTAGCCATCCTCTCTATGAACTCCTAGTTCAAGCTCACTTGCAGTGTTTGAAGGTAGGTGAAATTTCCGACTTGGAGAGAGCGTTGGAGATGGATCAGAAGCTAATTATGAACAGGCAAAGCTTGGACGTATTCAGCGAGCCAGAGCTTGATCTCTTCATGGAAGCATATTGCAAGGCGTTGGGGAAGCTGAAGGTAGATATGGAGGAACCACAACAAAAGGTGATGGCTTTCATAAACAACATGCATTCACAGTTGAAGGAGCTCACTTTGCCTGGTCATCACCCACCTGCTGCGTCGTCTCCCACAACTTCTTCTGCTCACTGCAATATTCTTCAAAGTGATTGA 432 0.4537 MDMESERLHSAENSEQGLEKDDVLKRRISSHPLYELLVQAHLQCLKVGEISDLERALEMDQKLIMNRQSLDVFSEPELDLFMEAYCKALGKLKVDMEEPQQKVMAFINNMHSQLKELTLPGHHPPAASSPTTSSAHCNILQSD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral336g00002 143 MobiDBLite consensus disorder prediction 118 143 - -
Pral336g00002 143 Pfam KNOX1 domain 24 52 IPR005540 GO:0003677|GO:0005634
Pral336g00002 143 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 11 118 - -
Pral336g00002 143 MobiDBLite consensus disorder prediction 125 143 - -
Pral336g00002 143 Pfam KNOX2 domain 74 118 IPR005541 GO:0003677|GO:0005634
Pral336g00002 143 SMART KNOX1_2 22 62 IPR005540 GO:0003677|GO:0005634
Pral336g00002 143 SMART KNOX2_2 68 119 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral336g00002 Pral-Chr336 23309 24961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral336g00002 22 117 Homeobox Transcription Factor Family AT4G08150 36.275 1.46e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral336g00002 - - gsj:114367439 155.606