Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3365g00002 ATGTCGAAAGGCCTGATTTCTTACAGTTATAAGGATTTGAAGTTGGCAACCAAGAATTTTAGGGAAGAAAATAAACTGGGAGAAGGAGGGTTTGGTGTTGTATACAAGGGTACTCTGGAAGGTGGGAAAGTAGTTGCAGTCAAGAAATTAAATTTTCGCCAATTCACAAGGATGGAGGAAGAGTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTTCATCATCTAAATCTTGTTCGACTTCTAGGATGTTGCAGTGAAGGACAAAACAGAATTCTTGTTTATGAATATATGAAAAATAATAGTCTTGACAGGCACCTATTTGGTAAAGGGAAGGGTTCTCTCAACTGGAAGCAAAGGTGTAACATAATTTTAGGAACAGCAAAAGGGTTGGCTTATCTACATGAGGAGTTTCATGTTCGTATCATACATAGAGATATAAAGACTAACAACATCCTTTTAGATGATAATTTACAGCCTAAAATTGCTGATTTTGTATTGGCGAGGCTTTTGCCTGAGGACAAATCTCATCTCAGCACAAAATTTGCAGGAACATTAGGATACACAGCACCTGAATATCTTATTCATGGCCAATTATCAGAGAAAGTTGATATCTATAGTTATGGTGTTGTAGTCTTAGAAATCATTAGTGGTCGACAAAGTAAAGAATTAACCATCGATGGTGATGATGAGGGTCAATTCCTCCTTCAAATGGCTTGGAAATTATATGAGAGGGATATGCACCTAGAGTTGGTGGACAAAACCTTAAGCCCTTTTGACTATGATGAAGAAGAAGTGAAGAAGATGATAGAGATTGGTTTGCTTTGCACTCAAGCATCTACAGAAGGAAGGCCAATGATGTCTGAAGTAGTTGTTTTGCTCCAAAACAAGGATTTGTTAGAGAATAGGAAGCCCACTATGCCTATCTTGATTGAAACTAATTAA 942 0.3715 MSKGLISYSYKDLKLATKNFREENKLGEGGFGVVYKGTLEGGKVVAVKKLNFRQFTRMEEEFESEVKLISNVHHLNLVRLLGCCSEGQNRILVYEYMKNNSLDRHLFGKGKGSLNWKQRCNIILGTAKGLAYLHEEFHVRIIHRDIKTNNILLDDNLQPKIADFVLARLLPEDKSHLSTKFAGTLGYTAPEYLIHGQLSEKVDIYSYGVVVLEIISGRQSKELTIDGDDEGQFLLQMAWKLYERDMHLELVDKTLSPFDYDEEEVKKMIEIGLLCTQASTEGRPMMSEVVVLLQNKDLLENRKPTMPILIETN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3365g00002 313 Gene3D Transferase(Phosphotransferase) domain 1 97 305 - -
Pral3365g00002 313 CDD STKc_IRAK 26 295 - -
Pral3365g00002 313 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 311 - -
Pral3365g00002 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pral3365g00002 313 Pfam Protein kinase domain 20 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3365g00002 313 ProSiteProfiles Protein kinase domain profile. 20 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3365g00002 313 SUPERFAMILY Protein kinase-like (PK-like) 5 293 IPR011009 -
Pral3365g00002 313 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Pral3365g00002 313 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pral3365g00002 313 FunFam Cysteine-rich receptor-like protein kinase 2 97 301 - -
Pral3365g00002 313 SMART serkin_6 20 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3365g00002 313 FunFam Cysteine-rich receptor-like protein kinase 2 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3365g00002 Pral-Chr3365 16748 22556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3365g00002 7 294 Receptor kinase-like Gene Family AT1G56120 51.903 2.90e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3365g00002 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3365g00002 - - pcin:129300003 474.167