Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00016 ATGCCTCAACCTAATAAACCCCTTTTTCCTTTAATCACCTTCATCTTTTGGTCATGGTGGACGCTTATTAACGGCGCCGTTTCGGAGCCACAGACCAATCTTCTAAGCACAGGCTGCTCTCCATCTATTAACCAATTCGTTGTGACCAACTTCTCCGTCTTCAGTGAAAACGTCAACAGAACGTTCCTCCATATCAGAAAGCAGATTGTGAATAAGAGTAAGCACTTTGCGACGGCGCAGCAAGCCAGCGTAGAAAACTCCGTTTTCGCTCTTTTTCAGTGCAGAAACTACATCTCCATTCATGACTGTGTTGTCTGCTTCGACGTCGCCGCCAAACAAGTCCGCAAATGCGCTGCCGGAACACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTGCGAGACCAAGACTTTCTTCGACCAAACAACGGAGGATTTTAATGCCGCATCATGTGGAAATCAAACTGTAGCAGAATCCTCCACATTATTTACCTCACTTGGGCAAAAAGTGCTACGGAATCTCCAAACAACAACACCCAAAAAGCAAGGATTTGTCATGGCGACAAAAGCACATTTGCCTGCCAATAATAATGGTACATTAACTATTTATGGCTTTGCTCAATGTACTCAAACAATCACACAGAGAGGGTGCGACGATTGCTTGAAGGCTTGTTATAGTAATATGCAGATTTGTCTTCCCAATTTGGATGGTAAGGCTTTTGCTGGTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACTACCAGACGATTGATATCACCCCCATGGAGAAACAAGGTCCAAGCAATAAGAGGGCCATAATTGTTGGTGGAGTCGTTGGAGGTGTAGTTCTTGTTTTGATCCTCCTTATATTATTTTTCTGCATTGTACGGCGAAAATGCACCAAGAGAGTTTATAGAGGCGACATAATGAGAGCAGCTAAGTTGAAAGGCCTTGTAAGATATAGTTATAAGGACTTGAAGTTTGCAACTGAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTAAGAGATGGGAAAGAAGTTGCAGTCAAAAAGTTAACTTTACGAAATTCCAGGAGAATGGAAGAAGGTTTCGAGAGTGAAGTAATGCTCATAAGTGATGCTCATCATCCCAATCTTGTTCAACTTTTAGGATGGTGTAGCAGTGGCCTTATCAGAATTCTTGTTTATGAGTACATGAAAAACAACAGCCTTGACAAATTCTTATTTGGTGAAAAGAAAGGTTATCTCAACTGGAAGCAGCGATGTGACATAATTTTAGGAATAGCAAGCGGTTTGACTTATCTTCATGAGCAATTCCGAGTTCGTATTATACATAGAGATATAAAGACTAATAATATTCTCTTAGACGATGATCTACAACCTAGGATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGAGGATAGATCTCATCTTAGCACAAAATTTGCTGGAACCTTTCCTTGA 1518 0.4203 MPQPNKPLFPLITFIFWSWWTLINGAVSEPQTNLLSTGCSPSINQFVVTNFSVFSENVNRTFLHIRKQIVNKSKHFATAQQASVENSVFALFQCRNYISIHDCVVCFDVAAKQVRKCAAGTQGGRAVYDGCFLRCETKTFFDQTTEDFNAASCGNQTVAESSTLFTSLGQKVLRNLQTTTPKKQGFVMATKAHLPANNNGTLTIYGFAQCTQTITQRGCDDCLKACYSNMQICLPNLDGKAFAGGCFMRYSTTSFFPDNYQTIDITPMEKQGPSNKRAIIVGGVVGGVVLVLILLILFFCIVRRKCTKRVYRGDIMRAAKLKGLVRYSYKDLKFATENFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLRNSRRMEEGFESEVMLISDAHHPNLVQLLGWCSSGLIRILVYEYMKNNSLDKFLFGEKKGYLNWKQRCDIILGIASGLTYLHEQFRVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPEDRSHLSTKFAGTFP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00016 505 SMART serkin_6 339 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00016 505 ProSiteProfiles Protein kinase domain profile. 339 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00016 505 FunFam Os07g0541700 protein 416 503 - -
Pral3364g00016 505 Gene3D Transferase(Phosphotransferase) domain 1 416 505 - -
Pral3364g00016 505 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Pral3364g00016 505 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Pral3364g00016 505 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 504 - -
Pral3364g00016 505 SUPERFAMILY Protein kinase-like (PK-like) 322 504 IPR011009 -
Pral3364g00016 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral3364g00016 505 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Pral3364g00016 505 FunFam Somatic embryogenesis receptor kinase 1 310 415 - -
Pral3364g00016 505 Pfam Protein tyrosine and serine/threonine kinase 342 495 IPR001245 GO:0004672|GO:0006468
Pral3364g00016 505 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Pral3364g00016 505 Gene3D - 34 140 IPR038408 -
Pral3364g00016 505 Gene3D - 145 255 IPR038408 -
Pral3364g00016 505 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Pral3364g00016 505 Pfam Salt stress response/antifungal 44 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00016 Pral-Chr3364 150721 154906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00016 87 504 Receptor kinase-like Gene Family AT1G70530 37.559 1.82e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00016 PK_Tyr_Ser-Thr 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00016 - - pcin:129300003 622.854