Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00015 ATGCCTCAACCTAATAAACCCCTTTTTCCTTTAATCACCTTCATCTTTTGGTCATGGTGGACGCTTATTAACGGCGCCGTTTCGGAGCCACAGACCAATCTTCTAAGCACAGGCTGCTCTCCATCTATTAACCAATTCGTTGTGACCAACTTCTCCGTCTTCAGTGAAAACGTCAACAGAACGTTCCTCCATATCAGAAAGCAGATTGTGAATAAGAGTAAGCACTTTGCGACGGCGCAGCAAGCCAGCGTAGAAAACTCCGTTTTCGCTCTTTTTCAGTGCAGAAACTACATCTCCATTCATGACTGTGTTGTCTGCTTCGACGTCGCCGCCAAACAAGTCCGCAAATGCGCTGCCGGAACACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTGCGAGACCAAGACTTTCTTCGACCAAACAACGGAGGATTTTAATGCCGCATCATGTGGAAATCAAACTGTAGCAGAATCCTCCACATTATTTACCTCACTTGGGCAAAAAGTGCTACGGAATCTCCAAACAACAACACCCAAAAAGCAAGGATTTGTCATGGCGACAAAAGCACATTTGCCTGCCAATAATAATGGTACATTAACTATTTATGGCTTTGCTCAATGTACTCAAACAATCACACAGAGAGGGTGCGACGATTGCTTGAAGGCTTGTTATAGTAATATGCAGATTTGTCTTCCCAATTTGGATGGTAAGGCTTTTGCTGGTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACTACCAGACGATTGATATCACCCCCATGGAGAAACAAGGTCCAAGCAATAAGAGGGCCATAATTGTTGGTGGAGTCGTTGGAGGTGTAGTTCTTGTTTTGATCCTCCTTATATTATTTTTCTGCATTGTACGGCGAAAATGCACCAAGAGAGTTTATAGAGGCGACATAATGAGAGCAGCTAAGTTGAAAGGCCTTGTAAGATATAGTTATAAGGACTTGAAGTTTGCAACTGAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTAAGAGATGGGAAAGAAGTTGCAGTCAAAAAGTTAACTTTACGAAATTCCAGGAGAATGGAAGAAGGTTTCGAGAGTGAAGTAATGCTCATAAGTGATGCTCATCATCCCAATCTTGTTCAACTTTTAGGATGGTGTAGCAGTGGCCTTATCAGAATTCTTGTTTATGAGTACATGAAAAACAACAGCCTTGACAAATTCTTATTTGGTGAAAAGAAAGGTTATCTCAACTGGAAGCAGCGATGTGACATAATTTTAGGAATAGCAAGCGGTTTGACTTATCTTCATGAGCAATTCCGAGTTCGTATTATACATAGAGATATAAAGACTAATAATATTCTCTTAGACGATGATCTACAACCTAGGATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGAGGATAGATCTCATCTTAGCACAAAATTTGCTGGAACCTTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGCTGATATTTATAGTTATGGTATTGTAATCCTTGAAATCATTAGTGGTCAAAGAAGCAAAGCATTAAAGGATGATGGGGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAAAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGAGTATGATGCAGATGAAGTGAAGAAAATCATTGAGATTGGTTTGCTTTGCACTCAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAATTGGTTTGCTCCAAAGTAGTGACCTATTAGAGAATATAACGCCCTCTATGCCTCTCTTGATCGTAACTGATTAG 1899 0.4123 MPQPNKPLFPLITFIFWSWWTLINGAVSEPQTNLLSTGCSPSINQFVVTNFSVFSENVNRTFLHIRKQIVNKSKHFATAQQASVENSVFALFQCRNYISIHDCVVCFDVAAKQVRKCAAGTQGGRAVYDGCFLRCETKTFFDQTTEDFNAASCGNQTVAESSTLFTSLGQKVLRNLQTTTPKKQGFVMATKAHLPANNNGTLTIYGFAQCTQTITQRGCDDCLKACYSNMQICLPNLDGKAFAGGCFMRYSTTSFFPDNYQTIDITPMEKQGPSNKRAIIVGGVVGGVVLVLILLILFFCIVRRKCTKRVYRGDIMRAAKLKGLVRYSYKDLKFATENFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLRNSRRMEEGFESEVMLISDAHHPNLVQLLGWCSSGLIRILVYEYMKNNSLDKFLFGEKKGYLNWKQRCDIILGIASGLTYLHEQFRVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVILEIISGQRSKALKDDGDTEDEFLLPKAWKLYEKGMHLELVDNTLDPNEYDADEVKKIIEIGLLCTQAFADLRPTMSEVIGLLQSSDLLENITPSMPLLIVTD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00015 632 CDD STKc_IRAK 345 613 - -
Pral3364g00015 632 FunFam Somatic embryogenesis receptor kinase 1 310 415 - -
Pral3364g00015 632 SMART serkin_6 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00015 632 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Pral3364g00015 632 Gene3D Transferase(Phosphotransferase) domain 1 416 621 - -
Pral3364g00015 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral3364g00015 632 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
Pral3364g00015 632 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Pral3364g00015 632 Pfam Protein tyrosine and serine/threonine kinase 342 609 IPR001245 GO:0004672|GO:0006468
Pral3364g00015 632 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Pral3364g00015 632 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Pral3364g00015 632 Pfam Salt stress response/antifungal 44 137 IPR002902 -
Pral3364g00015 632 Gene3D - 145 255 IPR038408 -
Pral3364g00015 632 Gene3D - 35 140 IPR038408 -
Pral3364g00015 632 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00015 632 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Pral3364g00015 632 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Pral3364g00015 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00015 Pral-Chr3364 150199 154901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00015 7 628 Receptor kinase-like Gene Family AT1G70520 35.276 3.83e-115 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00015 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00015 - - pcin:129300003 815.839