Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00014 ATGCCTCAACCTAATAAACCCCTTTTTCCTTTAATCACCTTCATCTTTTGGTCATGGTGGACGCTTATTAACGGCGCCGTTTCGGAGCCACAGACCAATCTTCTAAGCACAGGCTGCTCTCCATCTATTAACCAATTCGTTGTGACCAACTTCTCCGTCTTCAGTGAAAACGTCAACAGAACGTTCCTCCATATCAGAAAGCAGATTGTGAATAAGAGTAAGCACTTTGCGACGGCGCAGCAAGCCAGCGTAGAAAACTCCGTTTTCGCTCTTTTTCAGTGCAGAAACTACATCTCCATTCATGACTGTGTTGTCTGCTTCGACGTCGCCGCCAAACAAGTCCGCAAATGCGCTGCCGGAACACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTGCGAGACCAAGACTTTCTTCGACCAAACAACGGAGGATTTTAATGCCGCATCATGTGGAAATCAAACTGTAGCAGAATCCTCCACATTATTTACCTCACTTGGGCAAAAAGTGCTACGGAATCTCCAAACAACAACACCCAAAAAGCAAGGATTTGTCATGGCGACAAAAGCACATTTGCCTGCCAATAATAATGGTACATTAACTATTTATGGCTTTGCTCAATGTACTCAAACAATCACACAGAGAGGGTGCGACGATTGCTTGAAGGCTTGTTATAGTAATATGCAGATTTGTCTTCCCAATTTGGATGGTAAGGCTTTTGCTGGTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACTACCAGACGATTGATATCACCCCCATGGAGAAACAAGGTCCAAGCAATAAGAGGGCCATAATTGTTGGTGGAGTCGTTGGAGGTGTAGTTCTTGTTTTGATCCTCCTTATATTATTTTTCTGCATTGTACGGCGAAAATGCACCAAGAGAGTTTATAGAGGCGACATAATGAGAGCAGCTAAGTTGAAAGGCCTTGTAAGATATAGTTATAAGGACTTGAAGTTTGCAACTGAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTAAGAGATGGGAAAGAAGTTGCAGTCAAAAAGTTAACTTTACGAAATTCCAGGAGAATGGAAGAAGGTTTCGAGAGTGAAGTAATGCTCATAAGTGATGCTCATCATCCCAATCTTGTTCAACTTTTAGGATGGTGTAGCAGTGGCCTTATCAGAATTCTTGTTTATGAGTACATGAAAAACAACAGCCTTGACAAATTCTTATTTGACGATGATCTACAACCTAGGATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGAGGATAGATCTCATCTTAGCACAAAATTTGCTGGAACCTTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGCTGATATTTATAGTTATGGTATTGTAATCCTTGAAATCATTAGTGGTCAAAGAAGCAAAGCATTAAAGGATGATGGGGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAAAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGAGTATGATGCAGATGAAGTGAAGAAAATCATTGAGATTGGTTTGCTTTGCACTCAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAATTGGTTTGCTCCAAAGTAGTGACCTATTAGAGAATATAACGCCCTCTATGCCTCTCTTGATCGTAACTGATTAG 1761 0.4179 MPQPNKPLFPLITFIFWSWWTLINGAVSEPQTNLLSTGCSPSINQFVVTNFSVFSENVNRTFLHIRKQIVNKSKHFATAQQASVENSVFALFQCRNYISIHDCVVCFDVAAKQVRKCAAGTQGGRAVYDGCFLRCETKTFFDQTTEDFNAASCGNQTVAESSTLFTSLGQKVLRNLQTTTPKKQGFVMATKAHLPANNNGTLTIYGFAQCTQTITQRGCDDCLKACYSNMQICLPNLDGKAFAGGCFMRYSTTSFFPDNYQTIDITPMEKQGPSNKRAIIVGGVVGGVVLVLILLILFFCIVRRKCTKRVYRGDIMRAAKLKGLVRYSYKDLKFATENFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLRNSRRMEEGFESEVMLISDAHHPNLVQLLGWCSSGLIRILVYEYMKNNSLDKFLFDDDLQPRIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVILEIISGQRSKALKDDGDTEDEFLLPKAWKLYEKGMHLELVDNTLDPNEYDADEVKKIIEIGLLCTQAFADLRPTMSEVIGLLQSSDLLENITPSMPLLIVTD 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00014 586 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Pral3364g00014 586 Gene3D Transferase(Phosphotransferase) domain 1 416 577 - -
Pral3364g00014 586 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Pral3364g00014 586 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Pral3364g00014 586 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Pral3364g00014 586 Pfam Salt stress response/antifungal 44 137 IPR002902 -
Pral3364g00014 586 FunFam Somatic embryogenesis receptor kinase 1 310 415 - -
Pral3364g00014 586 Pfam Protein tyrosine and serine/threonine kinase 428 563 IPR001245 GO:0004672|GO:0006468
Pral3364g00014 586 Pfam Protein tyrosine and serine/threonine kinase 342 427 IPR001245 GO:0004672|GO:0006468
Pral3364g00014 586 SUPERFAMILY Protein kinase-like (PK-like) 324 571 IPR011009 -
Pral3364g00014 586 Gene3D - 145 255 IPR038408 -
Pral3364g00014 586 Gene3D - 35 140 IPR038408 -
Pral3364g00014 586 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 425 580 - -
Pral3364g00014 586 ProSiteProfiles Protein kinase domain profile. 339 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00014 586 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00014 Pral-Chr3364 150199 154902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00014 7 582 Receptor kinase-like Gene Family AT1G70520 31.024 2.10e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00014 PK_Tyr_Ser-Thr 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00014 - - pcin:129300003 766.918