Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00013 ATGCCTCAACCTAATAAACCCCTTTTTCCTTTAATCACCTTCATCTTTTGGTCATGGTGGACGCTTATTAACGGCGCCGTTTCGGAGCCACAGACCAATCTTCTAAGCACAGGCTGCTCTCCATCTATTAACCAATTCGTTGTGACCAACTTCTCCGTCTTCAGTGAAAACGTCAACAGAACGTTCCTCCATATCAGAAAGCAGATTGTGAATAAGAGTAAGCACTTTGCGACGGCGCAGCAAGCCAGCGTAGAAAACTCCGTTTTCGCTCTTTTTCAGTGCAGAAACTACATCTCCATTCATGACTGTGTTGTCTGCTTCGACGTCGCCGCCAAACAAGTCCGCAAATGCGCTGCCGGAACACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTGCGAGACCAAGACTTTCTTCGACCAAACAACGGAGGATTTTAATGCCGCATCATGTGGAAATCAAACTGTAGCAGAATCCTCCACATTATTTACCTCACTTGGGCAAAAAGTGCTACGGAATCTCCAAACAACAACACCCAAAAAGCAAGGATTTGTCATGGCGACAAAAGCACATTTGCCTGCCAATAATAATGGTACATTAACTATTTATGGCTTTGCTCAATGTACTCAAACAATCACACAGAGAGGGTGCGACGATTGCTTGAAGGCTTGTTATAGTAATATGCAGATTTGTCTTCCCAATTTGGATGGTAAGGCTTTTGCTGGTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACTACCAGACGATTGATATCACCCCCATGGAGAAACAAGGTCCAAGCAATAAGAGGGCCATAATTGTTGGTGGAGTCGTTGGAGGTGTAGTTCTTGTTTTGATCCTCCTTATATTATTTTTCTGCATTGTACGGCGAAAATGCACCAAGAGAGTTTATAGAGGCGACATAATGAGAGCAGCTAAGTTGAAAGGCCTTGTAAGATATAGTTATAAGGACTTGAAGTTTGCAACTGAGAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTAAGAGATGGGAAAGAAGTTGCAGTCAAAAAGTTAACTTTACGAAATTCCAGGAGAATGGAAGAAGGTTTCGAGAGTGAAGTAATGCTCATAAGTGATGCTCATCATCCCAATCTTGTTCAACTTTTAGGATGGTGTAGCAGTGGCCTTATCAGAATTCTTGTTTATGAGTACATGAAAAACAACAGCCTTGACAAATTCTTATTTGTCCTTGAAATCATTAGTGGTCAAAGAAGCAAAGCATTAAAGGATGATGGGGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAAAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGAGTATGATGCAGATGAAGTGAAGAAAATCATTGAGATTGGTTTGCTTTGCACTCAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAATTGGTTTGCTCCAAAGTAGTGACCTATTAGAGAATATAACGCCCTCTATGCCTCTCTTGATCGTAACTGATTAG 1590 0.422 MPQPNKPLFPLITFIFWSWWTLINGAVSEPQTNLLSTGCSPSINQFVVTNFSVFSENVNRTFLHIRKQIVNKSKHFATAQQASVENSVFALFQCRNYISIHDCVVCFDVAAKQVRKCAAGTQGGRAVYDGCFLRCETKTFFDQTTEDFNAASCGNQTVAESSTLFTSLGQKVLRNLQTTTPKKQGFVMATKAHLPANNNGTLTIYGFAQCTQTITQRGCDDCLKACYSNMQICLPNLDGKAFAGGCFMRYSTTSFFPDNYQTIDITPMEKQGPSNKRAIIVGGVVGGVVLVLILLILFFCIVRRKCTKRVYRGDIMRAAKLKGLVRYSYKDLKFATENFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLRNSRRMEEGFESEVMLISDAHHPNLVQLLGWCSSGLIRILVYEYMKNNSLDKFLFVLEIISGQRSKALKDDGDTEDEFLLPKAWKLYEKGMHLELVDNTLDPNEYDADEVKKIIEIGLLCTQAFADLRPTMSEVIGLLQSSDLLENITPSMPLLIVTD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00013 529 SUPERFAMILY Protein kinase-like (PK-like) 321 429 IPR011009 -
Pral3364g00013 529 Gene3D - 145 255 IPR038408 -
Pral3364g00013 529 Gene3D - 34 140 IPR038408 -
Pral3364g00013 529 Pfam Salt stress response/antifungal 44 137 IPR002902 -
Pral3364g00013 529 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Pral3364g00013 529 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Pral3364g00013 529 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Pral3364g00013 529 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 427 523 - -
Pral3364g00013 529 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Pral3364g00013 529 FunFam Somatic embryogenesis receptor kinase 1 310 415 - -
Pral3364g00013 529 Gene3D Transferase(Phosphotransferase) domain 1 425 522 - -
Pral3364g00013 529 ProSiteProfiles Protein kinase domain profile. 339 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00013 529 Pfam Protein tyrosine and serine/threonine kinase 342 425 IPR001245 GO:0004672|GO:0006468
Pral3364g00013 529 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00013 Pral-Chr3364 150199 154902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00013 87 427 Receptor kinase-like Gene Family AT1G70530 32.184 1.08e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00013 PK_Tyr_Ser-Thr 2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00013 - - pcin:129301902 573.163