Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00012 ATGCCTCAACCTAATAAACCCCTTTTTCCTTTAATCACCTTCATCTTTTGGTCATGGTGGACGCTTATTAACGGCGCCGTTTCGGAGCCACAGACCAATCTTCTAAGCACAGGCTGCTCTCCATCTATTAACCAATTCGTTGTGACCAACTTCTCCGTCTTCAGTGAAAACGTCAACAGAACGTTCCTCCATATCAGAAAGCAGATTGTGAATAAGAGTAAGCACTTTGCGACGGCGCAGCAAGCCAGCGTAGAAAACTCCGTTTTCGCTCTTTTTCAGTGCAGAAACTACATCTCCATTCATGACTGTGTTGTCTGCTTCGACGTCGCCGCCAAACAAGTCCGCAAATGCGCTGCCGGAACACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTGCGAGACCAAGACTTTCTTCGACCAAACAACGGAGGATTTTAATGCCGCATCATGTGGAAATCAAACTGTAGCAGAATCCTCCACATTATTTACCTCACTTGGGCAAAAAGTGCTACGGAATCTCCAAACAACAACACCCAAAAAGCAAGGATTTGTCATGGCGACAAAAGCACATTTGCCTGCCAATAATAATGGTACATTAACTATTTATGGCTTTGCTCAATGTACTCAAACAATCACACAGAGAGGGTGCGACGATTGCTTGAAGGCTTGTTATAGTAATATGCAGATTTGTCTTCCCAATTTGGATGGTAAGGCTTTTGCTGGTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACTACCAGACGATTGATATCACCCCCATGGAGAAACAAGGTCCAAGCAATAAGAGGGCCATAATTGTTGGTGGAGTCGTTGGAGGTGTAGTTCTTGTTTTGATCCTCCTTATATTATTTTTCTGCATTGTACGGCGAAAATGCACCAAGAGAGTTTATAGAGGTGAAAAGAAAGGTTATCTCAACTGGAAGCAGCGATGTGACATAATTTTAGGAATAGCAAGCGGTTTGACTTATCTTCATGAGCAATTCCGAGTTCGTATTATACATAGAGATATAAAGACTAATAATATTCTCTTAGACGATGATCTACAACCTAGGATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGAGGATAGATCTCATCTTAGCACAAAATTTGCTGGAACCTTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGCTGATATTTATAGTTATGGTATTGTAATCCTTGAAATCATTAGTGGTCAAAGAAGCAAAGCATTAAAGGATGATGGGGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAAAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGAGTATGATGCAGATGAAGTGAAGAAAATCATTGAGATTGGTTTGCTTTGCACTCAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAATTGGTTTGCTCCAAAGTAGTGACCTATTAGAGAATATAACGCCCTCTATGCCTCTCTTGATCGTAACTGATTAG 1557 0.4213 MPQPNKPLFPLITFIFWSWWTLINGAVSEPQTNLLSTGCSPSINQFVVTNFSVFSENVNRTFLHIRKQIVNKSKHFATAQQASVENSVFALFQCRNYISIHDCVVCFDVAAKQVRKCAAGTQGGRAVYDGCFLRCETKTFFDQTTEDFNAASCGNQTVAESSTLFTSLGQKVLRNLQTTTPKKQGFVMATKAHLPANNNGTLTIYGFAQCTQTITQRGCDDCLKACYSNMQICLPNLDGKAFAGGCFMRYSTTSFFPDNYQTIDITPMEKQGPSNKRAIIVGGVVGGVVLVLILLILFFCIVRRKCTKRVYRGEKKGYLNWKQRCDIILGIASGLTYLHEQFRVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVILEIISGQRSKALKDDGDTEDEFLLPKAWKLYEKGMHLELVDNTLDPNEYDADEVKKIIEIGLLCTQAFADLRPTMSEVIGLLQSSDLLENITPSMPLLIVTD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00012 518 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 296 - -
Pral3364g00012 518 FunFam Cysteine-rich receptor-like protein kinase 2 302 506 - -
Pral3364g00012 518 Pfam Protein kinase domain 307 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00012 518 Gene3D - 145 255 IPR038408 -
Pral3364g00012 518 Gene3D - 34 140 IPR038408 -
Pral3364g00012 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Pral3364g00012 518 Pfam Salt stress response/antifungal 158 252 IPR002902 -
Pral3364g00012 518 Pfam Salt stress response/antifungal 44 137 IPR002902 -
Pral3364g00012 518 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Pral3364g00012 518 Gene3D Transferase(Phosphotransferase) domain 1 308 507 - -
Pral3364g00012 518 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Pral3364g00012 518 ProSiteProfiles Protein kinase domain profile. 142 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00012 518 SUPERFAMILY Protein kinase-like (PK-like) 312 503 IPR011009 -
Pral3364g00012 518 SMART serkin_6 196 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00012 Pral-Chr3364 150199 154902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00012 313 512 Receptor kinase-like Gene Family AT1G56120 48.000 5.06e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00012 Pkinase 3.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00012 - - pcin:129302578 449.899