LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3364g00011	ATGCTTCAGCGTCCTAATAATCTCCTTCCGTTGTTTACCTTTTTCATATTCCTCTCATTCTGGGACCTTAACGGCGTCGTTTCGGATCCGCAGACCAATCTTGTGAGCAGATTCTGCAACCCCTACGATGGATTGCTCGTCTCCAACATCTCCATCTTCGATGAAAACCTAAACGCAACGTTGAGAGACATCAGAAAGCAGATTACTGAACAAAACAAGCACTTCGCTACGGCGCAGGAAGCCAATGGAGGAAACCCCGCTGCCACACTTTTTCAGTGCAGAAACTATCTCTCCGTCGCCGACGACTGTGTCGCCTGCTTTGATGTCGCCGCCGTGAGAATTCACAGTTGCGCCGCTGGGTCCCCCGGTGGTTTCGTCGTCTATGATGGGTGCTTCCTCAGGTATGATGCGAGCAACGCTTTCTTTGGTGAGACAACGCCGTCAATCAACAGTGTAAGATGTGATGGGAATCAGACTGCTGATGGAGAAGCCACTGCATTTGACTCAACAGCTCAACAAGTCCTAACCAATCTCCAAACCAGAACACCCACAGCCACTGGTTTCTCTGCAGCCACAAAGATGCAAGTTCCCGCTAATAATAATAATAACGCTCAAACTATTTATGCTTTTGCTCAATGTATTGAAACCATCACTCAGAATCAGTGCCTCAGTTGCTTGAATGCTGCGTATAGAAATTTGCAGACTTGTTTTCCCAATTCGGATGGTAAGGCTTTTGCTAATGGCTGTTTCATGAGATACTCCACCACATCCTTCTTTCCTGATAACCAGACCTTTCACATTGTACCCTTGATCAAACATGGTTCAAATAATAAGAAGGGGACCATTAAAGGTGTAATTGTTGGAGGAGTAGCTTTTGTTTTGATCCTCCTTGCACTATTGGCTTGGATTAAAAGACCAAAAAGGCCCGAGAGATCAGTTCCTAGAGGGGACCTATCTGCAGTAAGTAAGTTGAAAGGCCCAATAAATTTTACTTATAGCGAGTTGAAGTTTGCTACTAAGAATTTCAGTGCTGAAAATAAACTTGGGGAAGGAGGGTTTGGAGCTGTATATAAGGGCACTTTGAAGAATGGGAATATAGTTGCTGTAAAGAAATTAACTTTACGCCAGTCTAAGAAGGTGGAGGAAGAATTTGAAAGTGAAGTGAAGCTTATAAACAATGTTCATCATCGAAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAGGCAATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGCCTTGACAAATTCTTATTTGGTAAAAATAGAGGTTCTCTTAGTTGGAAGCAGCGGTATGATATAATTTTAGGAACAGCAAGGGGTTTGGCTTATCTACATGAAGAATTTCATGTTCGTATCATACATAGAGATATAAAAACTAACAATATTCTCTTAGACGATGATCTCCAACCAAGAATTGCTGACTTCGGTTTAGCAAGGCTTCTACCTGAGGAGAAAACTCATCTAAGCACAAAATTTGCAGGAACATTAGGATACACAGCGCCAGAATATGCAATTCATGGTCAATTATCAGAAAAGGCTGATATTTATAGCTATGGCGTTGTAGTCCTAGAAGTTATGAGTGGTGAACGAAGCAATGAATTGAATTTTGAAGGCGAATTCCTCATTCGAAAAGCTTGGAAGCTATATGAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTGGATCCTAATGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAAATTGGTCTACTCTGCACCCAAGCATCTGCAGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTCCAAGGCAACGACTTATTAGAAAATATGATGAAACCCACCATGCCTATCTTGATTGAAACTTAA	1896	0.414	MLQRPNNLLPLFTFFIFLSFWDLNGVVSDPQTNLVSRFCNPYDGLLVSNISIFDENLNATLRDIRKQITEQNKHFATAQEANGGNPAATLFQCRNYLSVADDCVACFDVAAVRIHSCAAGSPGGFVVYDGCFLRYDASNAFFGETTPSINSVRCDGNQTADGEATAFDSTAQQVLTNLQTRTPTATGFSAATKMQVPANNNNNAQTIYAFAQCIETITQNQCLSCLNAAYRNLQTCFPNSDGKAFANGCFMRYSTTSFFPDNQTFHIVPLIKHGSNNKKGTIKGVIVGGVAFVLILLALLAWIKRPKRPERSVPRGDLSAVSKLKGPINFTYSELKFATKNFSAENKLGEGGFGAVYKGTLKNGNIVAVKKLTLRQSKKVEEEFESEVKLINNVHHRNLIRLLGCCSKGNERILIYEYMKNTSLDKFLFGKNRGSLSWKQRYDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPEEKTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEVMSGERSNELNFEGEFLIRKAWKLYERGIHIELVDDTLDPNDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNDLLENMMKPTMPILIET	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3364g00011	631	Gene3D	Transferase(Phosphotransferase) domain 1	419	622	-	-
	Pral3364g00011	631	SUPERFAMILY	Protein kinase-like (PK-like)	323	611	IPR011009	-
	Pral3364g00011	631	ProSiteProfiles	Gnk2-homologous domain profile.	149	258	IPR002902	-
	Pral3364g00011	631	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	91	626	-	-
	Pral3364g00011	631	ProSiteProfiles	Protein kinase domain profile.	342	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3364g00011	631	Pfam	Salt stress response/antifungal	51	136	IPR002902	-
	Pral3364g00011	631	Pfam	Salt stress response/antifungal	159	255	IPR002902	-
	Pral3364g00011	631	FunFam	Cysteine-rich receptor-like protein kinase 2	308	418	-	-
	Pral3364g00011	631	CDD	STKc_IRAK	348	613	-	-
	Pral3364g00011	631	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	463	475	IPR008271	GO:0004672\|GO:0006468
	Pral3364g00011	631	Gene3D	-	31	139	IPR038408	-
	Pral3364g00011	631	Gene3D	-	148	258	IPR038408	-
	Pral3364g00011	631	SMART	serkin_6	342	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3364g00011	631	ProSiteProfiles	Gnk2-homologous domain profile.	34	140	IPR002902	-
	Pral3364g00011	631	Pfam	Protein kinase domain	343	545	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3364g00011	631	Gene3D	Phosphorylase Kinase; domain 1	317	418	-	-
	Pral3364g00011	631	FunFam	Cysteine-rich receptor-like protein kinase 2	419	619	-	-
	Pral3364g00011	631	ProSitePatterns	Protein kinases ATP-binding region signature.	348	371	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3364g00011	Pral-Chr3364	141710	146095	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3364g00011	1	630	Receptor kinase-like Gene Family	AT1G70520	35.770	1.51e-119	368

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral3364g00011		Pkinase	7.9e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3364g00011	-		-	gmx:100813585	770.77