Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00008 ATGCTTCGACCTTCTTGTCTTCTTCCCTTACTTACGTTCATATTCTGGTCACGCTCCACTCTTAACGGCGTCGTTTCAGATCCACAGACCAACCTTCTTAAGATCCAGTGCAACCCATTCAACGAGTTCTTCGTTACCAACATCTCCATCTACCATGACAACCTAAACGCAACGTTTCAAGCCATCAGAGAGCAGATCAGTGACCAAAACAAGCACTTCGCCACTGCACAACAGCAACGCCTTGGAGAAAACCCCATTATCACTCTTTTTCAGTGCAGAAACTACCTTACCATCCCCGACTGTGTCGCGTGCTTCGATGCCGCCGCCATACGAATCCGTAGCTGCGTCGCCGCCGTAGCCCCCGGTGCCCATGTCGTCTACGACGGCTGCTTCCTCAGGTACAACTCCAATGGTTTCTTTGACGAGACGACGCAACCTTTCAATTTCGTATCGTGTGGGAATCAGACTACGGGAGATCAAGCCATTACCACAACAGTGCGACAGGTGCTAATGAATCTCCAAATAACAACACCTCGAATGCCTAGTTTCTTTGCAGCCACGAAGATTAATGTTCCAAATAATAATAATGGTACAAATATTTATGCGTTTGCTCAATGTGTTGAGACTATCACAACCGATGGTTGCCTTGATTGCTTGAAGGGTAGGTTCAATAGTATAGAGATTTGTCTTCCTTTTTCAGATGGCAATGCTTTTGATGCTGGTTGTTTCTTGAGATACTCCACCACTTCCTTCTTTAATGATACCCACACAATTGATATCACGCCCATCATCAAACAAGGATCAAGCAAAAAGGGGGTTACAATTGGAGGGGTTGTTGGAGGTCTTGCTCTTGTGTTAATCCTCGTTGCACTGTTTGCCTGGACTAGACGACCAAGAAGGAATAAGAGGGTTCCTAGAGGAGACATGACTGGAGCAAGCAAGTTGAAAGGTCTAGCTACTTATAATTATAATGATTTGGTATATGCAACCAAGAATTTCAGTGAAGAGTACAAACTAGGAGAAGGAGGATTTGGGGTTGTATACAAGGGCACTATGAAGAATGGGAAAGTTGTTGCAATCAAGAAATTAACTTTACAACAATCCAGGAAGATGGAAGAGGATTTTGAAAGTGAAGTGATGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGGCTTCTGGGATATTGTAGTGAAGGGCATGATAGAATCCTTATTTATGAATATATGAAAAACAGCAGCTTTGACAAATTCCTGTTCGAAAAGGCTGATGTTTATAGTTATGGTGTTGTTATGTTAGAAGTTATCAGTGGTCAGAAAAGCACGGAATTAAGGCTTGATAATAATGATGAGGGTGCATTCCTCCTTCAAAAGGCTTGGAAACTTTATGAGAAAGACAGGCACTTGGAATTGGTGGACAATACCTTAGATCCTAATGCCTATGATGCAGAAGAAGTGAAGAGAATCATAGAGATTGGTTTGCTTTGCATCCAAGCATCTGCTGATAGGAGACCAATGATGTCTGAAATAGTTGTTTTGCTCCAAAATAAGGACTTATTAGAGAACATAACGCCCACTATGCCAATCTTGATTGAAGCTAATTAG 1605 0.4237 MLRPSCLLPLLTFIFWSRSTLNGVVSDPQTNLLKIQCNPFNEFFVTNISIYHDNLNATFQAIREQISDQNKHFATAQQQRLGENPIITLFQCRNYLTIPDCVACFDAAAIRIRSCVAAVAPGAHVVYDGCFLRYNSNGFFDETTQPFNFVSCGNQTTGDQAITTTVRQVLMNLQITTPRMPSFFAATKINVPNNNNGTNIYAFAQCVETITTDGCLDCLKGRFNSIEICLPFSDGNAFDAGCFLRYSTTSFFNDTHTIDITPIIKQGSSKKGVTIGGVVGGLALVLILVALFAWTRRPRRNKRVPRGDMTGASKLKGLATYNYNDLVYATKNFSEEYKLGEGGFGVVYKGTMKNGKVVAIKKLTLQQSRKMEEDFESEVMLISNVHHRNLVRLLGYCSEGHDRILIYEYMKNSSFDKFLFEKADVYSYGVVMLEVISGQKSTELRLDNNDEGAFLLQKAWKLYEKDRHLELVDNTLDPNAYDAEEVKRIIEIGLLCIQASADRRPMMSEIVVLLQNKDLLENITPTMPILIEAN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00008 534 Gene3D Phosphorylase Kinase; domain 1 306 409 - -
Pral3364g00008 534 ProSiteProfiles Gnk2-homologous domain profile. 30 139 IPR002902 -
Pral3364g00008 534 SUPERFAMILY Protein kinase-like (PK-like) 322 524 IPR011009 -
Pral3364g00008 534 ProSiteProfiles Protein kinase domain profile. 333 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00008 534 Pfam Protein tyrosine and serine/threonine kinase 337 421 IPR001245 GO:0004672|GO:0006468
Pral3364g00008 534 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Pral3364g00008 534 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Pral3364g00008 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 421 - -
Pral3364g00008 534 FunFam Cysteine-rich receptor-like protein kinase 2 298 409 - -
Pral3364g00008 534 Gene3D Transferase(Phosphotransferase) domain 1 419 527 - -
Pral3364g00008 534 Gene3D - 146 251 IPR038408 -
Pral3364g00008 534 Gene3D - 30 139 IPR038408 -
Pral3364g00008 534 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Pral3364g00008 534 Pfam Salt stress response/antifungal 46 136 IPR002902 -
Pral3364g00008 534 Pfam Salt stress response/antifungal 156 248 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00008 Pral-Chr3364 90601 97083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00008 419 532 Receptor kinase-like Gene Family AT1G70520 32.773 6.20e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00008 Stress-antifung 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00008 - - pcin:129301902 576.63