Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00007 ATGGAAATCAGTTTCACTGCTTATTGTGAAAACCCTTTCCGGTTCGACAGGTACAACTATAACACTTTCTTTAACGAGGCAACGCAAACTTTCAATGGCGTATCATGTGGGAATGAGACTACAGGAGGAGCTTCTGCATTTTCTGAAGCAAGGCAACAAGTACTAACCAATCTCCAAATATCAACACCAACAATCCCAAGTTTCTTTGCGGCCACGAAGATTCAAGTTTCAAATAGCGGTTCAACTATCTATGCCTTTGCCCAGTGTGTTAATACTATCACAGCGAATGGGTGTCTAAATTGCTTGAAGGCTGGGTACAGTAATTTGCAGATTTGTCTTCCATTTACCGATGGTAGGGCTTTTGATGCAGGCTGTTTCTTGAGATATTCCAGTGCGTTCCTTTTTCCTAATGACCAAACAATTGGTATCACACACTTTGTCAAACAAGGTTCTTCAAGCAAGAAAGGGGCAACTGTTGGTGGAGTTGTTGGAGGTGTATCTCTTACTTTGATCCTCCTTGCATTATTTGCCTGGATTAAACGACGGAAAAGAGATAAGAATGTTCCTCAAGGAAACCATTTGAAAAGCGACTTAACTGGATCAAGCAAGTTGAAAGGTCCAGTTACATACAGTTATAACGATTTGGTGCTTGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGGGCTGTATACAAGGGCACTCTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACTTCATCTCGCTCCAAGAGGGTGGAGGAAGAATTTGAAAGTGAGGTGATGCTTATAAACAATGTTCATCATCGGAATCTTGTTCGACTGCTGGGTTGTTGTAGTAAAGGCTACAACAAAATCCTTGTCTATGAATACATGAAAAATAGCAGCCTCGACAGATTCATATTTGGTAAAAAGAAGGGTTCTCTTAGTTGGAAGCAACGATATGACATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTACATGAGGAATTTCATGTGCGTATCATACACAGAGATATCAAGACTAATAACATCCTCTTGGATGATGATCTGCAACCTAAGATTGCTGATTTTGGGTTAGCAAGGTTGCTACCTGAGAACAAATCTCATGTAAGCACAAGACTCGCAGGAACATTAGGATATACAGCGCCGGAATATGCAATTTATGGCCAGTTATCTGAGAAAGCTGATATCTATAGTTATGGTGTTGTAGTTCTGGAGATCATTAGTGGTCAAAAGTGTAGAAAATTAAATGTTGATGATGATGAAGGGGCATCCCTTCTTCAAAAGGCTTGGAATTTATATGAGAAAGGAAGGCATTTAGAGTTGATGGACAAGACCTTAGAACCTAATGTATATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCCGTTGATACAAGGCCAATGATGTCTGCAGTAGTTGCTTTGCTTCAAAAGAAGGATTTGTCAGAGAACCTTAGGCCCACTATGCCTATCTTGATAGAAATTAATTAG 1545 0.3948 MEISFTAYCENPFRFDRYNYNTFFNEATQTFNGVSCGNETTGGASAFSEARQQVLTNLQISTPTIPSFFAATKIQVSNSGSTIYAFAQCVNTITANGCLNCLKAGYSNLQICLPFTDGRAFDAGCFLRYSSAFLFPNDQTIGITHFVKQGSSSKKGATVGGVVGGVSLTLILLALFAWIKRRKRDKNVPQGNHLKSDLTGSSKLKGPVTYSYNDLVLATKNFSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTSSRSKRVEEEFESEVMLINNVHHRNLVRLLGCCSKGYNKILVYEYMKNSSLDRFIFGKKKGSLSWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLLPENKSHVSTRLAGTLGYTAPEYAIYGQLSEKADIYSYGVVVLEIISGQKCRKLNVDDDEGASLLQKAWNLYEKGRHLELMDKTLEPNVYDAEEVKKIIEIGLLCTQASVDTRPMMSAVVALLQKKDLSENLRPTMPILIEIN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00007 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Pral3364g00007 514 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 508 - -
Pral3364g00007 514 Gene3D Transferase(Phosphotransferase) domain 1 299 506 - -
Pral3364g00007 514 FunFam Cysteine-rich receptor-like protein kinase 2 31 134 - -
Pral3364g00007 514 Gene3D Phosphorylase Kinase; domain 1 194 298 - -
Pral3364g00007 514 SMART serkin_6 222 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00007 514 Pfam Salt stress response/antifungal 40 131 IPR002902 -
Pral3364g00007 514 FunFam Cysteine-rich receptor-like protein kinase 2 182 298 - -
Pral3364g00007 514 Pfam Protein tyrosine and serine/threonine kinase 225 493 IPR001245 GO:0004672|GO:0006468
Pral3364g00007 514 CDD STKc_IRAK 228 496 - -
Pral3364g00007 514 ProSitePatterns Protein kinases ATP-binding region signature. 228 251 IPR017441 GO:0005524
Pral3364g00007 514 ProSiteProfiles Protein kinase domain profile. 222 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00007 514 Gene3D - 28 133 IPR038408 -
Pral3364g00007 514 SUPERFAMILY Protein kinase-like (PK-like) 201 495 IPR011009 -
Pral3364g00007 514 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Pral3364g00007 514 FunFam Cysteine-rich receptor-like protein kinase 2 299 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00007 Pral-Chr3364 71126 75458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00007 15 512 Receptor kinase-like Gene Family AT1G70520 38.507 8.13e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00007 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00007 - - gmx:100813585 625.165