Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00003 ATGCTTCGACCTGCTCGTCTTCTTCATCCCTTCTTCTTCCTCCTCCTCCTGTTCTGGTCATGCTGGACTCTAAACGTCGTCGTTTCAGAGCCACAGACCAATCTTCTGTACACTGCGTGCAGCCCTTTCTACGAGTTCGTGGTCTCCAACTTCACCATCTTCAGTGAGAACCTAAACGCAACGTTTCGAGATCTGAGAGATCAGGTCAAAGACCAAAGCAAGCACTTTGCCACGTCGCAGCGAGGTGATCAGAACAACCCCGCTTCCTCTCTTTTTCAGTGCAGAGATTATCTCTCCATCGCCGACTGTCTTGCCTGCTTCGATGTCGCCGCCGTCGCAATACGCAATTGCTCCGCCGGGACCCATGGTTCTCGGGTCGTCTACGATGGCTGCTTTCTCAGGTACGAGGTGAGCACTTTCTTCAGCGAGACAACGTCATTTAATGCTGTGTCGTGTGGGAATCGTAGTGCATCAGGAGAAGCCACAGAATTTACATCAGCAGCACAAAAATTGCTAACGAATCTGAGAACGACAACACCAACCGTGTCTGGCTTTTATGCAGCTTCCAAGACGCAAGTGCCTAATAATGGTCCAACTATTTATGCCTTCGCTCAGTGTATAGAAACTATCACACAAAGTGCTTGCCTCGATTGCTTAAACGCTGGGGACAACAATATGCAGACTTGTCTTCCCAATTCAGATGGCAGGGCTTATGCTGCTGGCTGCTTCATCAGATACTCCACCTCTTCCTTCTTTCCTGATAACCAGACTATTAATACCATACCGTTGGCCAAACAAGGTAGTAGCAATAATAAGGGGGCTATTATTGGCGGTGTAGTTGGAGCTGCGGCCGTTGTTTTGGTCCTACTTGGATTATTTGTTTGGATCAAACGACCAAAAAAGCCACAGAGTGTTCCTAGAGATGATATACCTGGAGCAAGCAAGTTGAAAGCACCAGAAGCTTACAATTATAGGGACTTGAAGCTGGCCACAAAAAATTTTAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTGCTGTATACAAGGGTACTTTGAAGAATGGAAAAGTAGTGGCGGTCAAGAAATTAACTGTACGCAAGTCCAATAGAATGGAGGAAGAATTTGAGAGCGAAGTGAAGCTGATAAGTAATGTTCATCATCGAAATCTTACTCGACTTCTGGGATGTTGTAGCAAAGGCGATGAGAGAATTCTTGTTTATGAATATATGAAAAATACTAGCCTTGATAGATTCTTATTTGGTAAAAGGAGAGGCTTTCTCACATGGAAGCAGAGATATGACATTATTGTAGGAACAGCAAGGGGTTTGACTTATCTACATGAAGAGTTTCATGTTCGAATAATACATAGAGATATAAAGACCAACAATATTCTCTTGGATGATGATTTTCAACCTAGAATTGCAGATTTTGGATTAGCAAGACTTTTACCTGAGAACAAATCTCATGTTAGCACAAGATTAGCTGGAACATTGGGATATACAGCACCTGAATATGCTATTCATGGCCAATTATCAGAAAAGGCCGATGTTTTCAGCTATGGCGTTGTAATCTTGGAAATCATCAGTGGTAAGAGAAGTGAAGAATTGAAGGTCCATGGCCATGATGAAGGCGAATTCCTGCTTCAAAAAGCTTGGAAACTATATGAGAAAAACATGCACTTAGAGTTGGTAGACAAAACTTTAGACCCTAATGACTATGATGAAGAAGAAGTGAAGAAAGTGATCGAGATTGGTTTGCTTTGCACTCAAGCATATGCTGACATAAGGCCAACGATGTCTGAAGTAGTTGTTTTGCTCCAAAACAAGGACTTGTCAGAAAACAGAAAACCCACCATGCCTCTCTTGATTGAAGCTCATTAA 1884 0.4305 MLRPARLLHPFFFLLLLFWSCWTLNVVVSEPQTNLLYTACSPFYEFVVSNFTIFSENLNATFRDLRDQVKDQSKHFATSQRGDQNNPASSLFQCRDYLSIADCLACFDVAAVAIRNCSAGTHGSRVVYDGCFLRYEVSTFFSETTSFNAVSCGNRSASGEATEFTSAAQKLLTNLRTTTPTVSGFYAASKTQVPNNGPTIYAFAQCIETITQSACLDCLNAGDNNMQTCLPNSDGRAYAAGCFIRYSTSSFFPDNQTINTIPLAKQGSSNNKGAIIGGVVGAAAVVLVLLGLFVWIKRPKKPQSVPRDDIPGASKLKAPEAYNYRDLKLATKNFSDENKLGEGGFGAVYKGTLKNGKVVAVKKLTVRKSNRMEEEFESEVKLISNVHHRNLTRLLGCCSKGDERILVYEYMKNTSLDRFLFGKRRGFLTWKQRYDIIVGTARGLTYLHEEFHVRIIHRDIKTNNILLDDDFQPRIADFGLARLLPENKSHVSTRLAGTLGYTAPEYAIHGQLSEKADVFSYGVVILEIISGKRSEELKVHGHDEGEFLLQKAWKLYEKNMHLELVDKTLDPNDYDEEEVKKVIEIGLLCTQAYADIRPTMSEVVVLLQNKDLSENRKPTMPLLIEAH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00003 627 Pfam Protein kinase domain 335 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00003 627 SMART serkin_6 334 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00003 627 FunFam Cysteine-rich receptor-like protein kinase 2 411 615 - -
Pral3364g00003 627 Gene3D Transferase(Phosphotransferase) domain 1 411 620 - -
Pral3364g00003 627 ProSiteProfiles Protein kinase domain profile. 334 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00003 627 CDD STKc_IRAK 340 609 - -
Pral3364g00003 627 Gene3D Phosphorylase Kinase; domain 1 307 410 - -
Pral3364g00003 627 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Pral3364g00003 627 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Pral3364g00003 627 ProSiteProfiles Gnk2-homologous domain profile. 34 140 IPR002902 -
Pral3364g00003 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral3364g00003 627 FunFam Cysteine-rich receptor-like protein kinase 2 302 410 - -
Pral3364g00003 627 Gene3D - 33 140 IPR038408 -
Pral3364g00003 627 Gene3D - 144 251 IPR038408 -
Pral3364g00003 627 SUPERFAMILY Protein kinase-like (PK-like) 317 607 IPR011009 -
Pral3364g00003 627 ProSitePatterns Protein kinases ATP-binding region signature. 340 368 IPR017441 GO:0005524
Pral3364g00003 627 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 624 - -
Pral3364g00003 627 Pfam Salt stress response/antifungal 52 136 IPR002902 -
Pral3364g00003 627 Pfam Salt stress response/antifungal 152 248 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00003 Pral-Chr3364 15314 21078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00003 4 611 Receptor kinase-like Gene Family AT1G70520 37.681 6.79e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00003 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00003 - - pcin:129300003 797.349