Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3364g00001 ATGCAGCGTGTTAGACGGTCAGAAAAGATTGAAAGGGTTCCTAGAGGTGAGATAACGGGAGAATCCAAGTTGAAAGGTTCAATCAATTATAGTTATAAGGAGTTGAAGTCTGCTACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACCGTATACAAGGGAACTTTGAAAAATGGAAAAACAATTGCAGTCAAGAAACTTATTATGCGACAGTCCAACAGTATGGATGAAGAATTTGAGAGTGAAGTGAGGCTAATAACTAATGTTCACCACCGAAATCTTGTTCGACTTCTAGGATGCTGCAGCAAAGGCAATGAGAGAATTCTCGTTTATGAATACATGAAAAACAACAGTCTCAACAGATACTTATTTGGTAGCAACAAAGGTTCTCTCAGTTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGTTTGACCTATCTACATGAGGAATTCCATATTTGCATTATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTCAGGATCAAACTCATCTTAGCACTAGATTTGCCGGAACACTCATGATGAATACTTCAAGGAAAAGTTCTTTTATATGTGGGATACACAGCACCTGA 675 0.3719 MQRVRRSEKIERVPRGEITGESKLKGSINYSYKELKSATKNFSEKNKLGEGGFGTVYKGTLKNGKTIAVKKLIMRQSNSMDEEFESEVRLITNVHHRNLVRLLGCCSKGNERILVYEYMKNNSLNRYLFGSNKGSLSWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPQDQTHLSTRFAGTLMMNTSRKSSFICGIHST 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3364g00001 224 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 207 - -
Pral3364g00001 224 Gene3D Transferase(Phosphotransferase) domain 1 119 209 - -
Pral3364g00001 224 SUPERFAMILY Protein kinase-like (PK-like) 26 207 IPR011009 -
Pral3364g00001 224 Gene3D Phosphorylase Kinase; domain 1 5 118 - -
Pral3364g00001 224 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Pral3364g00001 224 Pfam Protein kinase domain 42 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00001 224 FunFam Os07g0541700 protein 119 206 - -
Pral3364g00001 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral3364g00001 224 FunFam Cysteine-rich receptor-like protein kinase 2 5 118 - -
Pral3364g00001 224 ProSiteProfiles Protein kinase domain profile. 42 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3364g00001 224 SMART serkin_6 42 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3364g00001 Pral-Chr3364 278 2114 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3364g00001 25 207 Receptor kinase-like Gene Family AT1G70530 57.065 1.42e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3364g00001 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3364g00001 - - gmx:100811953 334.724