LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3363g00002	ATGCTCACGCTTCAACCTGTTACTCTCCTTCTTCTCTTATTTACTACCTTCATATCCTGCAACGGCGTCGTTTCCGACCCCCAGACCAATCTTCTCAACTCTGGCTGCTTCCAGTACAACAGATTCGATCCTATGGATGCTAATTCCTTCAATCAAAGCCTAAACGCAGCGTTTGGAGATCTCAGAGATCAGATCGCTAACCAGAGCAAACACGTCGCCAAGGCGCAGCAAGCCAGCGGAGCCACCCCCGTTTTCGCTCTTTTTCAGTGCAGGAGCTATCTCTCCGTCGCCGACTGTGTCGCCTGCTTCACCGTCGCTGTCGCTCAAATCCGCAACTGCTCGGCCAACGCTGCTCGTGTCATCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGCAATTTCTTTGAGCAAGCAACAGGGTCTTTCAATTCTGCATCATGTGGAAATCAGACTCCAGAAGTAGCCACAACAACATTTAACTCAATTATTCGACAAGTGCTAATGAATCTTCAAACAGAAACACCCAGAATCACTGGTTTCTCTGCAGCCACAAAGACGCCAGAAGTGCCTGACAATAATAATATCAACACAACCATTTATGCCTATGCACAATGTACTGAAACTATCTCACAGAGTGGCTGCGAGGGTTGCTTGAAGCAAGGCTACGACACTATGCAGACTTGCCTTCCCAATTCAGATGGGAGGGCTTTTGATGCCGGCTGTTTCATCAGATACTCCACCACTTCCTTCTTTCCTGATAACCTCACCATTATTAATACCACACCCTTATCCAAACAAGGTTCCAGAAGCAACAAAGCGGCCATTATTGGTGGAGTTGCTGGTGGAGGTGTGGCTCTTTTTTTGGTTCTTCTTTCATTATTTGCCTGGATGCAGCGTGTTAGACGGTCAGAAAAGATTGAAAGGGTTCCTAGAGGTGAGATAACGGGAGAATCCAAGTTGAAAGGTTCAATCAATTATAGTTATAAGGAGTTGAAGTCTGCTACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACCGTATACAAGGGAACTTTGAAAAATGGAAAAACAATTGCAGTCAAGAAACTTATTATGCGACAGTCCAACAGTATGGATGAAGAATTTGAGAGTGAAGTGAGGCTAATAACTAATGTTCACCACCGAAATCTTGTTCGACTTCTAGGATGCTGCAGCAAAGGCAATGAGAGAATTCTCGTTTATGAATACATGAAAAACAACAGTCTCAACAGATACTTATTTGGTAGCAACAAAGGTTCTCTCAGTTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGTTTGACCTATCTACATGAGGAATTCCATATTTGCATTATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTCAGGATCAAACTCATCTTAGCACTAGATTTGCCGGAACACTGGGATACACAGCACCTGAATATACAATTCATGGCCAGTTATCAGAGAAAGCTGATACTTACAGTTATGGTATTATAGTCTTAGAAATCATTAGTGGCCAGAAGAACAGTGAACTAAAGATTGATGATCATGCTGATGGCGAATTCCTCCTTCAACAAGCTTGGAAACTATACGAGAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAAACCCTAACGAGTATGATACAGAAGAAGTGAAGAAAATCATCGAGATTAGTTTGCTTTGCACGCAAGCATCTCCTGCAGTAAGGCCAACAATGTCCGAGGTTGTTGTTTTGCTCCAAAGTAAAGGCTTGTCAAAGAATAAAATCAGACCTACCATGCCTTTCTTTGTTGAAACCGATTCAGGGTTCAAGGCAGACACTTCTAGCTATACTGCTTCCTCAAAATCTAACGCTACTATCTCTACTTCCACCATGATATCAGCAAGATCATGA	1989	0.4268	MLTLQPVTLLLLLFTTFISCNGVVSDPQTNLLNSGCFQYNRFDPMDANSFNQSLNAAFGDLRDQIANQSKHVAKAQQASGATPVFALFQCRSYLSVADCVACFTVAVAQIRNCSANAARVIYDGCFLRYESSNFFEQATGSFNSASCGNQTPEVATTTFNSIIRQVLMNLQTETPRITGFSAATKTPEVPDNNNINTTIYAYAQCTETISQSGCEGCLKQGYDTMQTCLPNSDGRAFDAGCFIRYSTTSFFPDNLTIINTTPLSKQGSRSNKAAIIGGVAGGGVALFLVLLSLFAWMQRVRRSEKIERVPRGEITGESKLKGSINYSYKELKSATKNFSEKNKLGEGGFGTVYKGTLKNGKTIAVKKLIMRQSNSMDEEFESEVRLITNVHHRNLVRLLGCCSKGNERILVYEYMKNNSLNRYLFGSNKGSLSWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPQDQTHLSTRFAGTLGYTAPEYTIHGQLSEKADTYSYGIIVLEIISGQKNSELKIDDHADGEFLLQQAWKLYEKGMHLELVDNTLNPNEYDTEEVKKIIEISLLCTQASPAVRPTMSEVVVLLQSKGLSKNKIRPTMPFFVETDSGFKADTSSYTASSKSNATISTSTMISARS	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3363g00002	662	ProSiteProfiles	Gnk2-homologous domain profile.	32	134	IPR002902	-
	Pral3363g00002	662	FunFam	Cysteine-rich receptor-like protein kinase 2	142	250	-	-
	Pral3363g00002	662	Pfam	Protein kinase domain	338	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3363g00002	662	SUPERFAMILY	Protein kinase-like (PK-like)	323	635	IPR011009	-
	Pral3363g00002	662	Gene3D	Transferase(Phosphotransferase) domain 1	415	624	-	-
	Pral3363g00002	662	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	86	646	-	-
	Pral3363g00002	662	FunFam	Cysteine-rich receptor-like protein kinase 2	415	619	-	-
	Pral3363g00002	662	Gene3D	Phosphorylase Kinase; domain 1	300	414	-	-
	Pral3363g00002	662	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	459	471	IPR008271	GO:0004672\|GO:0006468
	Pral3363g00002	662	FunFam	Cysteine-rich receptor-like protein kinase 2	301	414	-	-
	Pral3363g00002	662	CDD	STKc_IRAK	344	612	-	-
	Pral3363g00002	662	Pfam	Salt stress response/antifungal	46	131	IPR002902	-
	Pral3363g00002	662	Pfam	Salt stress response/antifungal	154	247	IPR002902	-
	Pral3363g00002	662	ProSiteProfiles	Protein kinase domain profile.	338	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3363g00002	662	ProSitePatterns	Protein kinases ATP-binding region signature.	344	367	IPR017441	GO:0005524
	Pral3363g00002	662	Gene3D	-	140	250	IPR038408	-
	Pral3363g00002	662	Gene3D	-	30	134	IPR038408	-
	Pral3363g00002	662	ProSiteProfiles	Gnk2-homologous domain profile.	141	250	IPR002902	-
	Pral3363g00002	662	SMART	serkin_6	338	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3363g00002	Pral-Chr3363	22855	28220	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3363g00002	68	657	Receptor kinase-like Gene Family	AT1G70520	37.397	2.81e-127	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral3363g00002		Pkinase	2.5e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3363g00002	-		-	gmx:100813585	830.861