Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3363g00001 ATGCTTCAACGTCGTCGTATTCTCCTTCCCTTGGCCACCTTCATATTCTGGTCATGTTTCGACGGCGTCGTTTCCGACCCCCAGACCCATCTTCTGAACAGAGGGTGCAGCCAGTACAACGTCTCCAACTTGGCCAGCTTCAACGACAACCTAAACGCAACGTTTCGAGACCTCAGAGATCAGGTCGTCGCCCAGAGGAAGCTCTTCGCCACGGCACAGCAAGCCAAGGGAGGCAGCCCCGTCTACGCTCTTTTCCAATGCAGAAACTATCTCTCCGCCGCTGACTGTACCGCTTGCTTCAACATCGCCGCCGCACAGATACGGAACTGCTCCGCCGGAGCCAACGGTGCCCGCGTTATCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGTAGTTTCTATGATCAGACGACGCAGCCTGGCAACAGCATGGCTTGCGGGAATCAAACTTATGGAGATAACACAACATTTGACTCAACAGCTCAACAAATGCTAATCAATCTCCAAACAGCAACACCCAGAATTACTGGTTTCTTTGCAGCCACAAAGACTCGGATACCTAACAATGGTCCTACTGTCTATGCCATTGCTCAGTGTGTTGATACTGTCACACACAGTGGCTGCCTTGATTGCTTGAAGGTTGGCTACAACAATCTGCTGACTTGTCTTCCCACTTTGGAGGGTAGGGCTTTTGATGCTGGTTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTAATAACCAGACCATTGATATAACACCCTTCTTGAAACAAGGTTCAAGTAAGAGGGGAGCTATTATTGGTGGGGTCGCAGGAGGAGTGGCTTTTGTTTTGATTGTCCTTGCAGTGTTTCTTTTGATTATGCAACCCAAGAGGCCAAAGAAGGTTCCCAGAGATGACATACTGGGAGCAACAGAGTTGAAAGGACCTGTTAAGTACAGATATAAGGACTTGAAGATTGCAACAAAAAATTTTAGTGAAGAAAATAAACTGGGAGGAGGAGGATTTGGTGATGTATACAAGGGCACTCTTAAGAATGGGAAAATAGTTGCAGTCAAGAAATTAGCTTTAGGTAACAGCAAGAGGATAGATGAAGATTTTGAGAGTGAAGTGAAGCTTATTAGTAATGTTCATCATCGGAATCTTGTTCGCCTTTTGGGATGCTGCAGTAAAGGCCAAGAGAAGATCCTTGTTTATGAATACATGAAAAACAATAGTCTTGACAGATTCTTATTTGGCCAAAACAAAGGTTCTCTCAATTGGAAGCAACGGTATGAAATAATTTTAGGCACAGCAAGGGGTTTGGCCTATTTACATGAGGAATTCTATGTTTGTGTCATACATAGAGATATAAAGACCAACAACATCCTCTTAGACAATGATCTTCAGCCTAGAATTTCTGATTTTGGGTTGGCAAGACTTCTGCCTAAGGACCAATCTCATCTTAGCACAAAGTTCGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATTCAAGGTCAATTATCAGAGAAGGCCGATACCTATAGTTATGGAGTTGTAGTCCTAGAAATCATCAGCGGCCAAAAAAGCATTGAATTAAAGGTTGATCCTAATGCCGAAGGCGAATTCCTCCTTCAACAAGCCTGGAAACTATATGAGAAAGACATGCACTTGAAATTGGTGGACGAGACCTTAGAGCCTAATGACTATGATCCAGAAGAAGTGAAAAAAATCATAGAGATTGGTTTGCTTTGTACCCAAGCATCTCCTGCAATAAGGCCAACAATGTCTGAAGTTGTTCTTATGCTTAGAAGCAAGGGCTTAATGGAGCACATGAAACCCACTATGCCAGTCTTCATTGAAACTAATTTGACGTCTAGGGAAGGCACCTTAACCTCAACTTCTTTCCTTAATACCAATGCTACAGCCTCCACTATTACACTATCAGCAAGATGA 1944 0.4429 MLQRRRILLPLATFIFWSCFDGVVSDPQTHLLNRGCSQYNVSNLASFNDNLNATFRDLRDQVVAQRKLFATAQQAKGGSPVYALFQCRNYLSAADCTACFNIAAAQIRNCSAGANGARVIYDGCFLRYESSSFYDQTTQPGNSMACGNQTYGDNTTFDSTAQQMLINLQTATPRITGFFAATKTRIPNNGPTVYAIAQCVDTVTHSGCLDCLKVGYNNLLTCLPTLEGRAFDAGCFMRYSTTSFFPNNQTIDITPFLKQGSSKRGAIIGGVAGGVAFVLIVLAVFLLIMQPKRPKKVPRDDILGATELKGPVKYRYKDLKIATKNFSEENKLGGGGFGDVYKGTLKNGKIVAVKKLALGNSKRIDEDFESEVKLISNVHHRNLVRLLGCCSKGQEKILVYEYMKNNSLDRFLFGQNKGSLNWKQRYEIILGTARGLAYLHEEFYVCVIHRDIKTNNILLDNDLQPRISDFGLARLLPKDQSHLSTKFAGTLGYTAPEYAIQGQLSEKADTYSYGVVVLEIISGQKSIELKVDPNAEGEFLLQQAWKLYEKDMHLKLVDETLEPNDYDPEEVKKIIEIGLLCTQASPAIRPTMSEVVLMLRSKGLMEHMKPTMPVFIETNLTSREGTLTSTSFLNTNATASTITLSAR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3363g00001 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 623 - -
Pral3363g00001 647 Gene3D Transferase(Phosphotransferase) domain 1 403 611 - -
Pral3363g00001 647 Gene3D Phosphorylase Kinase; domain 1 295 402 - -
Pral3363g00001 647 Pfam Protein tyrosine and serine/threonine kinase 329 597 IPR001245 GO:0004672|GO:0006468
Pral3363g00001 647 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Pral3363g00001 647 Pfam Salt stress response/antifungal 39 130 IPR002902 -
Pral3363g00001 647 Pfam Salt stress response/antifungal 146 241 IPR002902 -
Pral3363g00001 647 FunFam Cysteine-rich receptor-like protein kinase 2 403 607 - -
Pral3363g00001 647 FunFam Cysteine-rich receptor-like protein kinase 2 292 402 - -
Pral3363g00001 647 Gene3D - 28 133 IPR038408 -
Pral3363g00001 647 Gene3D - 142 244 IPR038408 -
Pral3363g00001 647 SUPERFAMILY Protein kinase-like (PK-like) 314 630 IPR011009 -
Pral3363g00001 647 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Pral3363g00001 647 FunFam Cysteine-rich receptor-like protein kinase 2 28 133 - -
Pral3363g00001 647 SMART serkin_6 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3363g00001 647 FunFam Cysteine-rich receptor-like protein kinase 2 141 244 - -
Pral3363g00001 647 CDD STKc_IRAK 332 599 - -
Pral3363g00001 647 ProSiteProfiles Protein kinase domain profile. 326 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3363g00001 647 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Pral3363g00001 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3363g00001 Pral-Chr3363 3044 7641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3363g00001 7 647 Receptor kinase-like Gene Family AT1G70520 36.447 1.64e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3363g00001 PK_Tyr_Ser-Thr 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3363g00001 - - gmx:100813585 917.531