Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3360g00010 ATGGCCATTCATGATCAAAATGGAGTCACCAGACCTCACGGCAGCATTCCAGTAGGAAATGGAGTATCTTTGAGCTCTGGACTACATCCCGTTGCACGCGCTCATCTAAATGATCAATTTTCTTGTGCGAATGACTATGCTCCAAAGGTAAGGAAACCGTATACTATCACAAAACAAAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTTGAAGCTTTAAAATTGTACGGGCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACCACAGTTCAGATTCGAAGTCATGCTCAGAAGTTCTTTTCTAAGGTTCTTCGTGATCCTTGTGGGAACAGTACAGAGTCGATGGAGTCCATTGAAATTCCACCACCACGTCCAAAACGAAAGCCTATGCATCCGTACCCTCGTAAGCTGGTGGAGCTCCCTAACAAAGAAGCTTCCATACCAAAACAGCTAATGATGTCTAATTCTCTGAAATCATTAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTGTTATCTGCAGTTGGTTCAGACACCCTTGGTTCCTCTGATTCAGACACACCAAATGGAAGCTCGTCCCCAGTTTCATCCATTAGCACTGTTCATACCAACAGCTTCGTAGTTGCTGAACCTGAAATCCTACAATTGGAGGAGGATGGGTCTCCACCATCGGCTGGACTAAATGCTGATCTAACTCCTGATGAGCAACCACTTATGAAAGAAAGCATATCTACCAAGGAAGACGCTGCAGAAGAATCATCTGCTCGGATTCTGAAGCTTTTTGGGACGACTTTATTGGTAACAGATAACTGCGGGCTATCCTCTCCAACAATGGAAGCATGCAAGTTGCTTAACTCAAATTTTTTGCCAATGAAATCTCCTGACCGGGATGTGGAACGTGATGAGAATAATTTGCATAATGGAACACGCCGTGCTGTCTATAACATGCATTTTGAGAGTGGAAATTCAGGGCTTGCAGAAGGTGCTTCTGCTTCTTTTGTTCCATGTTGGAGTATTCCCCACATCAGATCACTGCCCAAGAAGGTGCATGAAGGAAAACAACCAGACTCCAGTCTTAGGGAAATTGAACATGTAGAAGTTATAAATGAAGGATATTTGACTAATCCAAACATTTGCTCTTCTGTGGATAAGGATGAAAAGCCAGATATGGAAGCCAAAAGAGATACTAAAGCTATTTTTGATCTGAAGAAGTGTGGGAAAGGGTTTGTGCCATACAAGAGGTGCATCGCAGAGAGGGAAAACCACGCCTCATCAGTAACTAAAGAGGAAAGGGAAGAACAACGGATTCGCCTTTCCTTGTAA 1341 0.434 MAIHDQNGVTRPHGSIPVGNGVSLSSGLHPVARAHLNDQFSCANDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGNSTESMESIEIPPPRPKRKPMHPYPRKLVELPNKEASIPKQLMMSNSLKSLDFDQENQSPKSVLSAVGSDTLGSSDSDTPNGSSSPVSSISTVHTNSFVVAEPEILQLEEDGSPPSAGLNADLTPDEQPLMKESISTKEDAAEESSARILKLFGTTLLVTDNCGLSSPTMEACKLLNSNFLPMKSPDRDVERDENNLHNGTRRAVYNMHFESGNSGLAEGASASFVPCWSIPHIRSLPKKVHEGKQPDSSLREIEHVEVINEGYLTNPNICSSVDKDEKPDMEAKRDTKAIFDLKKCGKGFVPYKRCIAERENHASSVTKEEREEQRIRLSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3360g00010 446 Gene3D - 62 108 - -
Pral3360g00010 446 MobiDBLite consensus disorder prediction 1 20 - -
Pral3360g00010 446 MobiDBLite consensus disorder prediction 427 446 - -
Pral3360g00010 446 MobiDBLite consensus disorder prediction 125 143 - -
Pral3360g00010 446 MobiDBLite consensus disorder prediction 167 204 - -
Pral3360g00010 446 SMART sant 59 107 IPR001005 -
Pral3360g00010 446 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Pral3360g00010 446 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Pral3360g00010 446 CDD SANT 62 105 IPR001005 -
Pral3360g00010 446 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Pral3360g00010 446 PANTHER SWI/SNF COMPLEX-RELATED 44 336 - -
Pral3360g00010 446 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Pral3360g00010 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Pral3360g00010 446 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Pral3360g00010 446 SUPERFAMILY Homeodomain-like 54 107 IPR009057 -
Pral3360g00010 446 MobiDBLite consensus disorder prediction 114 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3360g00010 Pral-Chr3360 57968 61777 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral3360g00010 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3360g00010 - - pcin:129303890 641.343