Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3358g00060 ATGCCCTTGGAAGCAGGGATTTTCATTGAGCCTCCACCTGCTTCTTCTTCTTCGTCGACCTCTGCTCCTCCTGATCTTTCTCTTCACATAAGCCCTCCATCAACTTCTTCTTTGATTTGCAGCAACAATAACTATGAAGCTCGGCACTACAGTACTAATAATTCTTCTTCAAACTCTAATTTCTCTTCTTCTTTATCTGCTCCTCGCTTTCATGCCCAAACTGAACTCTCACTGGGAAGCAATTTTGCTTGTGCAACGCAAGAACCAGTGACCCACCATAGCAAAAATAACGGCAACGCGAACCCTTATTTTCAGACCCCCCACCATCACCATTTTCTTCACCGCCAGATTAATCCCAATAATATGAATAACTATGGAGTATCATTGCTTGATGTGTCTCCTTCTTCTTCGCCGGACGGATTGAGGCCCATCAAAGGGATTCCGGTGTATCACAACCGTTCGTTCCCTTTCTTGCCGGTGGACCAAAACTACAAGGATAATCATCATCATCATCAGCAGCAGCAGCAGCAAGCCAGGATGTGCTTTTACAATCCTTCTTTCCCTTCTTCTTCTTCTTCGTCTCCTTCGGGTTCTCCGTACATGGCGGTGGCTGCCGGGGGGTTGGATCCCGTGTCGGCGGCGGCGTATAGGGGGGGTGGCACCGGCAGGTTTAATGGGATTTCTGGAGACGCTTTCAAATCTCATCATCATCAGTATGGGATGGTCGGGCCATCTTCTTCACATGACGCGTCTCCCAGTAGTGGGCTCATGAGATCCAGATTCTTGCCTAAGTTTCCCACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACCACCCTCCATGCTCGGTTCGTTCACGCCGTCGAGCTTCTCGGCGGCCATGAAAGAGCGACTCCGAAATCAGTTCTAGAACTGATGGATGTGAAGGATCTTACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCCTCTTCAGGCCACTCGGATGGATCTGGAGAAGATGACATATTTGCAGATCAAAGAGGAAGCAGAACAGATCGATCAGCACAGCAAGATATGGACTACTCTTCTACAACCACCACTCTATGGAGCAATTCTTCAAGTAGAGAGCCATGGCTTCAAAATAGTACCAAGGAGACGGATAGTCTAAGACCTGCCTTGCAGACACCACCATTATCATCATCAGGGCATCAAATTCAGGAGTGTGATTCAAGGCAAATGAAGGACAACAACATATCATGCATTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTAGGAAGACCAGATTGGAATGGCAAATGA 1350 0.4748 MPLEAGIFIEPPPASSSSSTSAPPDLSLHISPPSTSSLICSNNNYEARHYSTNNSSSNSNFSSSLSAPRFHAQTELSLGSNFACATQEPVTHHSKNNGNANPYFQTPHHHHFLHRQINPNNMNNYGVSLLDVSPSSSPDGLRPIKGIPVYHNRSFPFLPVDQNYKDNHHHHQQQQQQARMCFYNPSFPSSSSSSPSGSPYMAVAAGGLDPVSAAAYRGGGTGRFNGISGDAFKSHHHQYGMVGPSSSHDASPSSGLMRSRFLPKFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDIFADQRGSRTDRSAQQDMDYSSTTTTLWSNSSSREPWLQNSTKETDSLRPALQTPPLSSSGHQIQECDSRQMKDNNISCINLECKNPSLEFTLGRPDWNGK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3358g00060 449 MobiDBLite consensus disorder prediction 329 412 - -
Pral3358g00060 449 MobiDBLite consensus disorder prediction 1 33 - -
Pral3358g00060 449 FunFam Myb family transcription factor 272 330 - -
Pral3358g00060 449 NCBIfam myb-like DNA-binding domain, SHAQKYF class 274 327 IPR006447 GO:0003677
Pral3358g00060 449 MobiDBLite consensus disorder prediction 345 361 - -
Pral3358g00060 449 Gene3D - 273 330 - -
Pral3358g00060 449 MobiDBLite consensus disorder prediction 362 412 - -
Pral3358g00060 449 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 448 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral3358g00060 449 SUPERFAMILY Homeodomain-like 271 327 IPR009057 -
Pral3358g00060 449 Pfam Myb-like DNA-binding domain 275 326 IPR001005 -
Pral3358g00060 449 MobiDBLite consensus disorder prediction 12 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3358g00060 Pral-Chr3358 488386 493410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3358g00060 142 449 G2-like Transcription Factor Family AT5G16560 48.503 8.67e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3358g00060 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3358g00060 - - lja:Lj0g3v0089499.2 441.039