Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3358g00057 ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAATCTGAAATTAGCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAGCCTCCACAACGCGTCAGACAACACAAACACCATAGTATTTCAACTAAGTAATTCAGATCCTCTTTCACTTGACTTAACTCTTAGCTCTAATAACAGCGCGCTAGGCCCTGCTAGAGACTCCATAGGACTCTCATTCTCAAGCACCAGTGAGAGCAGTAATGAACCTGCGTCTCAAACCACATCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCACAGGCTCTCGGTGGCCACCAGAATGCACACAAGAGGGAAAGAACACTAGCAAAGAGAGCTATGAGAATGGGGTTTTTCTCTGAGAAGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCGTTAGGAATAAAAGCACACTCCTCACTCCACCATGGCTTTTCACCATCAATGATGAGGCCTTACGAGATGAAAAGCAATGCAAGATTCGATCAAGGGCATGTTGGGATGCCAATGTTCATGGAGGATGATGAGGCAGAACTGCTATGGCCTGGTAGTTTCCGGCAGGTTGGAGAGGCAAGTGATAATGATAATACTCATCATCACCAACATCATCATCAGAAGTTTGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCGGAAGTACACCTTGAGCAAGAGGACTCAACACCAGATTTAACATTGAAACTATGA 816 0.4485 MRPNLDLEVEASAENESEISSQVASNIFIHEISAGPSSDSLHNASDNTNTIVFQLSNSDPLSLDLTLSSNNSALGPARDSIGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSEKYASLASLPLHGSFRSLGIKAHSSLHHGFSPSMMRPYEMKSNARFDQGHVGMPMFMEDDEAELLWPGSFRQVGEASDNDNTHHHQHHHQKFVVTGSSNLSFAEVNPEVHLEQEDSTPDLTLKL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3358g00057 271 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Pral3358g00057 271 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 38 271 IPR044246 GO:0009788
Pral3358g00057 271 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Pral3358g00057 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Pral3358g00057 271 FunFam Zinc finger protein 2 85 154 - -
Pral3358g00057 271 Gene3D Classic Zinc Finger 85 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3358g00057 Pral-Chr3358 465367 466539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3358g00057 90 271 C2H2 Transcription Factor Family AT1G66140 48.815 1.43e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3358g00057 - - pcin:129303090 442.195