Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3358g00028 ATGCCGTTGGTGGCCGTTCCCTTCTCTGGAACCTCTCTCAGACGAGTCCTTGCTTATGGACGGGGGTGTTTTGTGAAAATTCTCCAAACAACAGGGTCACTGCGTTGCGGCTTCCTGGCGAATTTCTTCTCTGGAGAAATCCCTGATTTCCTTTATGGTATGCGGAACTTGGTTCGTTTGAGTTTAGCTAAAAACAATTTCAGTGGTGAGATCTCGCCTAACTTTAACAACCTCACGAGGTTAGACACCCTCCTTTTGGACAACAACCAGCTCACAGGGTCCATTCCTAACCTGACTGCTCCTCTTGATCAGTTTAATGTTTCGTCCAATCGGCTCAATGGGTCCATTCCCGCGAAGTTCTCGCACTTAGATGCTAGTGCATTTTCGGGGAATTTGTTTCTTTGCGGGAAGCCTTTGCAAGAATGCCCTGGAACGGAGGGTGGTGAGAAGAAGAAGAAGAAGAAGTTATCTGGTGGAGCAATTGCAGGAATTGTAATTGGTTCAGTGGTCGGGCTTCTGTTGATTTTACTTCTTTTGTTCTTCTTGTGCGGGAGGAGGAGCAGGAAAGACAAGGATTCGAAGGATGTAACTCCAGGTAAGAGCGTTGAGGTTGAAATTCCTCAAGAAAAGACAACTAGAGATATTGAGACTACTGGAGCAGGTTATTCAGCAACAGCCAGAGGTGGCGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGTAATGTCAGCAAAGTGTTTGATCTTGAGGATTTATTAAGGGCATCAGCAGAAGTACTGGGGAAGGGCACCTTTGGAACCACATACAAGGCTACTTTGGAAATTGGGGTGGTGGTGGCAGTGAAGAGGTTGAAGGATGTAACTGCTCCCGAAAACGAATTCAGAGAGAAAATTGAGCAAGTGGGGAAGATGATTCATGATAACTTAGTCCCGCTCAGGGCCTACTATTACAGCAACGAAGAAAAGCTTCTTGCCTATGATTACATGCCCATGGGAAGCTTATCTGCCCTTTTGCATGCTAATAACGGAGCTGGCCGAACACCACTAAACTGGGAAACGAGGTCTCGCATTGCCCTTGGTGCCGCCCGTGGGATTGCATACCTACACTCACATGGCCCATCTGCCTCCCATGGAAATATTAAGTCATCAAACATCCTTCTCACCAAATCTTTTGAAGCTCGTGTTTCTGACTTTGGCCTTGCTCATCTTGCACTCCCAACTTCAACCCCCAACCGTGTTTCTGGTTACCGAGCCCCAGAGGTAACAGATGCTCGCAAAGTGTCCCAAAAAGCAGATGTCTACAGTTTTGGTATAATGCTCTTGGAGCTTCTTACTGGGAAAGCTCCAACACATTCCTCGTTAAATGAAGAGGGGGTAGACCTCCCAAGATGGGTCCAATCTATTGTTCAAGAGGAGTGGAACACCGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCACTTGAATGCACTGAACAGTATCCTGACAATCGACCCGCAATGGATGTGGTGGCGAGCAGAATTGAGGAGATTTGTCGTGTCAGTTTAGAGAAAGAGGAAGAGAAGATTCAGTCATTGACAGATCCAGATAGTGGATATTCCCCACCTGGATACCAAATTTAA 1665 0.4661 MPLVAVPFSGTSLRRVLAYGRGCFVKILQTTGSLRCGFLANFFSGEIPDFLYGMRNLVRLSLAKNNFSGEISPNFNNLTRLDTLLLDNNQLTGSIPNLTAPLDQFNVSSNRLNGSIPAKFSHLDASAFSGNLFLCGKPLQECPGTEGGEKKKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGRRSRKDKDSKDVTPGKSVEVEIPQEKTTRDIETTGAGYSATARGGDAKTGRSKRLVFFGNVSKVFDLEDLLRASAEVLGKGTFGTTYKATLEIGVVVAVKRLKDVTAPENEFREKIEQVGKMIHDNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSRIALGAARGIAYLHSHGPSASHGNIKSSNILLTKSFEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDNRPAMDVVASRIEEICRVSLEKEEEKIQSLTDPDSGYSPPGYQI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3358g00028 554 Coils Coil 487 507 - -
Pral3358g00028 554 PANTHER OS05G0588300 PROTEIN 41 531 - -
Pral3358g00028 554 Pfam Protein kinase domain 259 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3358g00028 554 CDD STKc_IRAK 262 525 - -
Pral3358g00028 554 FunFam Probable inactive receptor kinase At1g48480 331 533 - -
Pral3358g00028 554 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Pral3358g00028 554 Gene3D Ribonuclease Inhibitor 25 151 IPR032675 -
Pral3358g00028 554 Gene3D Transferase(Phosphotransferase) domain 1 331 545 - -
Pral3358g00028 554 Gene3D Phosphorylase Kinase; domain 1 224 330 - -
Pral3358g00028 554 FunFam pollen receptor-like kinase 1 225 330 - -
Pral3358g00028 554 SUPERFAMILY Protein kinase-like (PK-like) 260 521 IPR011009 -
Pral3358g00028 554 ProSiteProfiles Protein kinase domain profile. 256 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3358g00028 554 SUPERFAMILY L domain-like 41 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3358g00028 Pral-Chr3358 177879 180845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3358g00028 22 525 Receptor kinase-like Gene Family AT1G48480 58.955 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3358g00028 Pkinase 3.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3358g00028 - - qsa:O6P43_020574 683.715