Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3358g00027 ATGAAGTCTCTGCTTCTGCTGGACTTCCTGGTTCCTGCTTTGTCGCTGTGTCTGTTCGCCATCGTAGGCGCCGATCTAGCTTCTGATAGAGCCGCTTTGGTGTCTCTGCGTGATGCCGTTGGTGGCCGTTCCCTTCTCTGGAACCTCTCTCAGACGAGTCCTTGCTTATGGACGGGGGTGTTTTGTGAAAATTCTCCAAACAACAGGGTCACTGCGTTGCGGCTTCCTGGTATGGGTCTTTCTGGGAGACTTCCACTGGGAATTGGGAATCTCACTGAGCTCCAGACTCTGTCTCTTCGCTATAACGCTCTCTCTGGGCCGATTCCAAACGACTTTGCTAATCTTGTTAACCTTCGAAACCTTTATTTGCAGGCGAATTTCTTCTCTGGAGAAATCCCTGATTTCCTTTATGGTATGCGGAACTTGGTTCGTTTGAGTTTAGCTAAAAACAATTTCAGTGGTGAGATCTCGCCTAACTTTAACAACCTCACGAGGTTAGACACCCTCCTTTTGGACAACAACCAGCTCACAGGGTCCATTCCTAACCTGACTGCTCCTCTTGATCAGTTTAATGTTTCGTCCAATCGGCTCAATGGGTCCATTCCCGCGAAGTTCTCGCACTTAGATGCTAGTGCATTTTCGGGGAATTTGTTTCTTTGCGGGAAGCCTTTGCAAGAATGCCCTGGAACGGAGGGTGGTGAGAAGAAGAAGAAGAAGAAGTTATCTGGTGGAGCAATTGCAGGAATTGTAATTGGTTCAGTGGTCGGGCTTCTGTTGATTTTACTTCTTTTGTTCTTCTTGTGCGGGAGGAGGAGCAGGAAAGACAAGGATTCGAAGGATGTAACTCCAGGTAAGAGCGTTGAGGTTGAAATTCCTCAAGAAAAGACAACTAGAGATATTGAGACTACTGGAGCAGGTTATTCAGCAACAGCCAGAGGTGGCGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGTAATGTCAGCAAAGTGTTTGATCTTGAGGATTTATTAAGGGCATCAGCAGAAGTACTGGGGAAGGGCACCTTTGGAACCACATACAAGGCTACTTTGGAAATTGGGGTGGTGGTGGCAGTGAAGAGGTTGAAGGATGTAACTGCTCCCGAAAACGAATTCAGAGAGAAAATTGAGCAAGTGGGGAAGATGATTCATGATAACTTAGTCCCGCTCAGGGCCTACTATTACAGCAACGAAGAAAAGCTTCTTGCCTATGATTACATGCCCATGGGAAGCTTATCTGCCCTTTTGCATGCTAATAACGGAGCTGGCCGAACACCACTAAACTGGGAAACGAGGTCTCGCATTGCCCTTGGTGCCGCCCGTGGGATTGCATACCTACACTCACATGGCCCATCTGCCTCCCATGGAAATATTAAGTCATCAAACATCCTTCTCACCAAATCTTTTGAAGCTCGTGTTTCTGACTTTGGCCTTGCTCATCTTGCACTCCCAACTTCAACCCCCAACCGTGTTTCTGGTTACCGAGCCCCAGAGGTAACAGATGCTCGCAAAGTGTCCCAAAAAGCAGATGTCTACAGTTTTGGTATAATGCTCTTGGAGCTTCTTACTGGGAAAGCTCCAACACATTCCTCGTTAAATGAAGAGGGGGTAGACCTCCCAAGATGGGTCCAATCTATTGTTCAAGAGGAGTGGAACACCGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCACTTGAATGCACTGAACAGTATCCTGACAATCGACCCGCAATGGATGTGGTGGCGAGCAGAATTGAGGAGATTTGTCGTGTCAGTTTAGAGAAAGAGGAAGAGAAGATTCAGTCATTGACAGATCCAGATAGTGGATATTCCCCACCTGGATACCAAATTTAA 1920 0.4708 MKSLLLLDFLVPALSLCLFAIVGADLASDRAALVSLRDAVGGRSLLWNLSQTSPCLWTGVFCENSPNNRVTALRLPGMGLSGRLPLGIGNLTELQTLSLRYNALSGPIPNDFANLVNLRNLYLQANFFSGEIPDFLYGMRNLVRLSLAKNNFSGEISPNFNNLTRLDTLLLDNNQLTGSIPNLTAPLDQFNVSSNRLNGSIPAKFSHLDASAFSGNLFLCGKPLQECPGTEGGEKKKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGRRSRKDKDSKDVTPGKSVEVEIPQEKTTRDIETTGAGYSATARGGDAKTGRSKRLVFFGNVSKVFDLEDLLRASAEVLGKGTFGTTYKATLEIGVVVAVKRLKDVTAPENEFREKIEQVGKMIHDNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSRIALGAARGIAYLHSHGPSASHGNIKSSNILLTKSFEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDNRPAMDVVASRIEEICRVSLEKEEEKIQSLTDPDSGYSPPGYQI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3358g00027 639 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Pral3358g00027 639 Coils Coil 572 592 - -
Pral3358g00027 639 SUPERFAMILY L domain-like 47 225 - -
Pral3358g00027 639 CDD STKc_IRAK 347 610 - -
Pral3358g00027 639 FunFam pollen receptor-like kinase 1 310 415 - -
Pral3358g00027 639 FunFam Probable inactive receptor kinase At1g48480 416 618 - -
Pral3358g00027 639 Pfam Protein kinase domain 344 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3358g00027 639 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pral3358g00027 639 SUPERFAMILY Protein kinase-like (PK-like) 345 605 IPR011009 -
Pral3358g00027 639 Gene3D Phosphorylase Kinase; domain 1 310 415 - -
Pral3358g00027 639 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Pral3358g00027 639 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pral3358g00027 639 Gene3D Ribonuclease Inhibitor 185 231 IPR032675 -
Pral3358g00027 639 Gene3D Transferase(Phosphotransferase) domain 1 416 630 - -
Pral3358g00027 639 ProSiteProfiles Protein kinase domain profile. 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3358g00027 639 PANTHER OS05G0588300 PROTEIN 12 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3358g00027 Pral-Chr3358 177879 181055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3358g00027 25 610 Receptor kinase-like Gene Family AT1G48480 60.680 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3358g00027 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3358g00027 - - qsa:O6P43_020574 833.943