Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3357g00002 ATGGCCGAAGGCTGGGATCTCTCCGCCGTCGTCCGAGGTTGCAGATCCTCCTCCCCTTCCTCCGCCACTGCCGCCGCCAGCACCACTACTTCCATTACGACACCGTCGTCTTCTTCATCCAAGGACCTTTCTTTACCATTAATCAAGGAAGAAAATGACATCTTCTCTTTCCCCAGTTTGACACAACCCAGAACCAGTGGGTTCCAAGAACTACACCAATTGTTCAGACCCTTTATCCCCACCACCACCAAAACCACCACTATCTCTACTAGTGGTTGTGGCATATATCCCAATTCCTCTTTTACTGATTTTGCAGGCGAAGGGTCCAGTAGTTGTACCAATAATAATAATATAGATACTGCATCATCATCATCATCATCACTTGTTGCTTCTGGTTCTTATGCTTCTCATATTAGGCCTCATTTTATGCCTCAAGCCTCGCCCGCCTCCACTTCTTCTTCTTCTGGCTTTCAAAGATTCCATGACCAACATGTACAGCAACTCCAACAACAAACTCAAATTCAAAATCAACTACAATTAGTTCATCAGAAACAGCAATTTCAAACACCACCAAATCAGATCAGCGGTGGTAACAGTAATAATTCTGGTATGACTTTACCAAATACGCAAGCTGCTCAAGCAATCAGATCGAGAAAAAGAAAGAGTCAACAGAAAAGAATGGTTTGCCATGTAACAGCTGAAAACCTCACCGCAGATTCGTGGGCCTGGAGAAAATACGGCCAAAAGCCTATTAAAGGCTCCCCGTACCCACGGAACTACTATAGATGTAGCAGTTCAAAAGGTTGTGGGGCCCGGAAGCAAGTAGAACGGAGCAACACTGAACCAGATATGTTCATCGTCGCGTACACCGGAGAACACACGCATCCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGTACTAGGAACAAACCGTCAACGACGACCCGTCAACCCGCCTCTCATGAATCTGGATCACCAAGCACGATCGCAAACCGGGCATCGTCATCTTCACAGCTTTCGCCGACGACGCCTTTAATGGCGGTGGCTACGAAAGACGAGTGCGCCGATGAACCCATGTTAAGCAATGAAGCCACTAGCCCTTTTCCAGAAGATGAGTTTGACTTGGCCTCTCATGATGACATTTTGATTCCGAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTGCTGGTGAGCTTCACAGCGCAATCGGACTTAGTGGCGGTGGGGGTACTAGCACAAGCGGCAATTCGGTGGATGGGTCGCACCAAAATGTTGAACCCGGCTTGGCTCCGAATCTACAACAGCAGTTCTCCCCTCTCAGCCGGTCTAGCCCTGGTTGA 1347 0.487 MAEGWDLSAVVRGCRSSSPSSATAAASTTTSITTPSSSSSKDLSLPLIKEENDIFSFPSLTQPRTSGFQELHQLFRPFIPTTTKTTTISTSGCGIYPNSSFTDFAGEGSSSCTNNNNIDTASSSSSSLVASGSYASHIRPHFMPQASPASTSSSSGFQRFHDQHVQQLQQQTQIQNQLQLVHQKQQFQTPPNQISGGNSNNSGMTLPNTQAAQAIRSRKRKSQQKRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVAYTGEHTHPRPTHRNSLAGSTRNKPSTTTRQPASHESGSPSTIANRASSSSQLSPTTPLMAVATKDECADEPMLSNEATSPFPEDEFDLASHDDILIPNMAAMMDKFLLGAGELHSAIGLSGGGGTSTSGNSVDGSHQNVEPGLAPNLQQQFSPLSRSSPG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3357g00002 448 MobiDBLite consensus disorder prediction 300 343 - -
Pral3357g00002 448 Gene3D WRKY domain 221 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3357g00002 448 MobiDBLite consensus disorder prediction 179 206 - -
Pral3357g00002 448 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3357g00002 448 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3357g00002 448 MobiDBLite consensus disorder prediction 254 343 - -
Pral3357g00002 448 SUPERFAMILY WRKY DNA-binding domain 231 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3357g00002 448 FunFam WRKY transcription factor 22 220 291 - -
Pral3357g00002 448 MobiDBLite consensus disorder prediction 409 448 - -
Pral3357g00002 448 MobiDBLite consensus disorder prediction 15 43 - -
Pral3357g00002 448 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 401 IPR044810 GO:0003700
Pral3357g00002 448 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3357g00002 Pral-Chr3357 316900 319031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3357g00002 216 365 WRKY Transcription Factor Family AT5G52830 64.901 6.11e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3357g00002 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3357g00002 - - pcin:129285324 535.798