Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3355g00006 ATGTTTAACTTGGTTCTCTTGCCAATCTCTACTTTCAATAATTTCATATTCTATGTGGTTCTCTTCTGTGCTTGCCTCTTTTCTGTTGCTCTTGCGACTGATCATCCATCTTCCTGGTGGGATGAAAAGATGCCTGTACTGGCCACTATTTCCTTCGTTGGTGGATTCGTAATTACAAGCGTACTTGTCATTATATTTGCAGCTATTATTCGACATAGCAAAATATTGAGACAAGTTCTGATTAGGAAAATAATAAAAGGACGAGAAAAAAAGCAGGGGAAGAAGCATGGCGATTTCACTTCAATGTGGAATTTTGATGGCCATATTGCATTTGAAGATATCATTAAAGCTACCGACGATTTCGATATCAAATACTGCATTGGAAGAGGAGCTTCTGGGGAGGTTTACAAGGAAAAACTTCCTTGTGGAAAAATTGTTGCAGTGAAGAAACTTCGCTATATGCAATCGGAAAATCTGTCATTTCATAAAAGCTTTTACAATGAGATTGAGATTTTGACAGAGATTCGTCATCGAAACATTGTTAAGTTGCATGGCTTTTGTTTGAATATACAGTGCATGTTTCTGGTGTATGGATTTATGGAATGTGGTAGCCTCTTACATGTTTTGAGAAATGAAGAAAAGGCTCAGAAGTTAACATGGAACAAGAGGCTCAATATTATTAATGGGATTGCTCATGCTGTTAGTTATATGCATCACGATTGTGTCCCTCCAATTATTCATCGAGACATAACAAGTGGTAATATCTTGTTAAACTCAGATATGGAAGCATTTGTCTCAGACTTTGGCACGGCTGGGACCCTTCATCCATATTCATCGAATCTAAGTCTTCTAGTTGGGACTTATGGCTATGTTGCTCCAGAGTTAGCATATGCAATATCAGCAACCCAAAAGAGTGATGTTTACAGCTTTGGAGTTGTTGCATTAGAAACTATGATGGGAAAGCATTCAGGAGAGTTAATTTCATGTTTAACAAAGGATTATACAGATCAAAAGATAATGCTAAGAGATATCTTAGACGCACGACTCCCTCAACCTCGCACTCGAAAAGAAATTTGGGATGTAATTCTTCTGATGACCATTGCCTTAGCATGCGTTTGTGCTGAACCAAATTGTAGGCCATCAATGAAGCAAGTGACTCAGAAACTTTCACTTTCTAGGCCACTTTTTACAGTTCCATTCAATGATATTTCAATTCACCAGTTGATGAGTCAAGACATAATTTCATGTAATTGA 1254 0.3756 MFNLVLLPISTFNNFIFYVVLFCACLFSVALATDHPSSWWDEKMPVLATISFVGGFVITSVLVIIFAAIIRHSKILRQVLIRKIIKGREKKQGKKHGDFTSMWNFDGHIAFEDIIKATDDFDIKYCIGRGASGEVYKEKLPCGKIVAVKKLRYMQSENLSFHKSFYNEIEILTEIRHRNIVKLHGFCLNIQCMFLVYGFMECGSLLHVLRNEEKAQKLTWNKRLNIINGIAHAVSYMHHDCVPPIIHRDITSGNILLNSDMEAFVSDFGTAGTLHPYSSNLSLLVGTYGYVAPELAYAISATQKSDVYSFGVVALETMMGKHSGELISCLTKDYTDQKIMLRDILDARLPQPRTRKEIWDVILLMTIALACVCAEPNCRPSMKQVTQKLSLSRPLFTVPFNDISIHQLMSQDIISCN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3355g00006 417 ProSiteProfiles Protein kinase domain profile. 121 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3355g00006 417 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3355g00006 417 FunFam Leucine-rich repeat receptor protein kinase MSP1 85 199 - -
Pral3355g00006 417 FunFam Leucine-rich repeat receptor-like protein kinase 200 396 - -
Pral3355g00006 417 ProSitePatterns Tyrosine protein kinases specific active-site signature. 245 257 IPR008266 GO:0004672|GO:0006468
Pral3355g00006 417 Gene3D Transferase(Phosphotransferase) domain 1 200 395 - -
Pral3355g00006 417 Gene3D Phosphorylase Kinase; domain 1 83 199 - -
Pral3355g00006 417 PANTHER LEUCINE RICH REPEAT KINASE 2 52 392 - -
Pral3355g00006 417 SUPERFAMILY Protein kinase-like (PK-like) 103 389 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3355g00006 Pral-Chr3355 283082 285116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3355g00006 41 293 Receptor kinase-like Gene Family AT4G08850 48.047 3.43e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3355g00006 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3355g00006 - - pcin:129289446 551.977