Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral3351g00002 | ATGAATTTTTTAGCACTATGTGCAAGTGGTTACTATGATGGGACAATTTTTCACCGCAACATCAAAGGTTTTATGATTCAAGGTGGAGATCCAACTGGTACTGGCAAAGGGGGCACCGGTATATGGGGCAAAAAATTTAACGATGAGATTAGAGAATCTCTCAAGCACAATGCGAGGGGGATATTGTCAATGGCTAACAGTGGTCCGAATACTAATGGAAGCCAATTTTTCATAACGTATGCAAAGCAGCCACATTTGAATGGACTGTATACCGTGTTTGGCAAAGTAATTCATGGATTTGAAGTACTTGATCTTATGGAAAAGACTCAAACGGGCCCAGGGGATCGACCACTTGCTGAGATAAGGCTGAACCGGGTAACAATACATGCTAATCCGCTGGCTGGTTAG | 408 | 0.4265 | MNFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTGIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFITYAKQPHLNGLYTVFGKVIHGFEVLDLMEKTQTGPGDRPLAEIRLNRVTIHANPLAG | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral3351g00002 | 135 | PIRSF | Peptidylpro_ismrse | 1 | 132 | IPR024936 | GO:0003755 | |
| Pral3351g00002 | 135 | Gene3D | - | 1 | 135 | IPR029000 | - | |
| Pral3351g00002 | 135 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 2 | 128 | IPR044666 | - | |
| Pral3351g00002 | 135 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 12 | 29 | IPR020892 | GO:0003755|GO:0006457 | |
| Pral3351g00002 | 135 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 2 | 127 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral3351g00002 | 135 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 88 | 103 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral3351g00002 | 135 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 60 | 75 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral3351g00002 | 135 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 17 | 29 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral3351g00002 | 135 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 75 | 87 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral3351g00002 | 135 | SUPERFAMILY | Cyclophilin-like | 2 | 132 | IPR029000 | - | |
| Pral3351g00002 | 135 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 128 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral3351g00002 | Pral-Chr3351 | 13652 | 27191 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral3351g00002 | 2 | 132 | U-box Gene Family | AT5G67530 | 55.725 | 1.20e-47 | 159 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral3351g00002 | K12734 | - | nnu:104611869 | 257.684 |