Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3346g00009 ATGGAGGAATTTTGGAGAGTCTTTTGTGAAGAATCAAGTTGTTCAGAAAGAGGGGGAATACATTGCAGTTATGATTTTGAACTTCTCAAAGATCCTTCAACGTGCATGAACCATTTGATGGTCATCTGCCTCAATGTGTTACTGCTGATTTTGCTTTTATTAACGGTAACACTTAAGTCCTCAACCAAGACATTTCATGGTTCTGTCCAAGCACAAAGGTTCTCAAGTTTGCAGGTAGCTTCTGCAATAGTGAGTGGCTGTCTTGGGTTAATTCATTTGTGCTTAGGCATTTGGATCTTAGAGGAGAAATTGAGGAAAACTCACACTGCTTTTCCTAGCCATTGGTGGATTCTAGAGATTTCTCAAGGGATCACATGGTTGTGTGTGGGTTTGACAATAAGTCTCAAGCTGACCAAACTTTCAAAACTATGGTCAAGACTAGTATCTATTCTGCTCCTCTTAATTTCTGGTATTTTTTGTGTTATTTCCATTTGCTTTGTCATTGGTGGAAGAGAAGTGTCCCTAAAGATAGCTTTAGATGTTTTACCGGTTCCTGGAGCAATTTTGTTGGTCATATGCTCATATAAGGGACGTCCGTTTGTTGAGAGAAATATCGATGGAAGCCTTTATGCTCCTTTAAATGGTGAGTCCACTGACATTGATAAAACTAGTTCTGCCGACCATGTAACCCCATTTGCAAAAGCTGGATTCTTTAGCAAAATGTCATTTTGGTGGTTGAATCCACTGATGAAAATGGGCAAGGAGAAAGCTATCCAGGAGGAAGATATCCCGAAGTTGCGAGAGGAAGATCAAGCTGAAAGCTGTTATTTGGTGTTTCTTGATCAGTTGAATAGGCAAAAACAGAAAGAACCATCTTCACAATCATCCATTTTCTGGACAATAATTCTGTGCCACTGGAAAGATATCTTCATATCTGGAATTTTTGCATTGCTTAAGGTACTCACTATCTCAGCTGGTCCACTGCTTCTAAATTCCTTTATATTGGTTGCTGAGGGTAAAGAAAGTTTCAAATATGAAGGATACATACTGGCCATAACGCTTTTCTTCACAAAGATCTTAGAATCAGTATCACAAAGGCAGTGGTACTTCCGAAGCAGGCTCATTGGTTTACGAGTTAGATCACTGCTTAGTGCAGCCATTTATAAAAAGCAATTGAGGCTATGTAATGCTTCAAGGCTGATGCACTCAGGTGGGGAGATTATGAACTATGTAACCGTAGATGCTTATAGAATTGGAGAATTTCCCTTTTGGTTTCACCAGACTTGGACAACAAGTGTTCAATTATGTATTGCAATAGTAATTCTTTTTAATGCTGTGGGGCTAGCAACCATTGCTTCTTTGGTGGTCATAGTTCTCACTGTTCTTTGCAATACTCCACTAGCAAAGCTACAACATACGTTTCAGACCAAACTTATGGTGGCACAAGACGAGAGATTGAAGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTACTGAAGCTCTATGCATGGGAAACCCACTTTAAGAAAGCTATTGAAAGCTTGAGGAAAGTTGAGCTCAAGTTTTTAACTTCTGTGCAGTTAAGAAGGGCATACAACACCTTTCTCTTTTGGTCTTCACCTGTTTTGGTCTCTGCTGCTACTTTTGGGGCATGTTACTTCCTAAAAGTTCCTTTACATGCGAATAACGTCTTCACTTTTGTTGCAACTCTACGCCTTGTTCAAGATCCGATCAGAACAATCCCCGATGTTATTGGGGTGGTCATTCAAGCTAAAGTAGCATTTGCTCGGATTGTGAAATTCCTCGAGGCACCAGAATTGCAGAGCGCAAATGCCAGAAAGAAGAGCTTAAATGGCTGTCTTAATGGCTCTATTCGCATCAATTCTGCGAACTTCTCATGGGAAGATAATGATTCAAAGCCCACCTTGAGAAACATAAATCTTGATGTTAAACCTGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCTGGCAAGTCAACCTTATTGGCTTCAATTCTTGGAGAAGTTCCCAAAACTCATGGAACTATTGAAGTCCATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATTCAAACAGGCACAATAAGGGATAATATATTGTTTGGCTCAGCCATGGATGCTCAAAGGTATCAAGAAACGCTTGAGAGGTCATCATTAGTGAAAGATCTTGCCTTGTTTCCATATGGTGATCTCACAGAAATAGGGGAGAGAGGTGTGAACCTTAGTGGAGGTCAAAAACAACGAATTCAACTCGCTCGCGCTCTTTATCAGAATGCCGATATATATCTGTTGGATGATCCATTCAGTGCTGTTGATGCACATACAGCCTCAAATTTGTTTAGTGAATATGTCATGGAAGCACTTAGAGAAAAGACTGTCATGCTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTATTTTGCTCATGTGTGATGGGGAAATTCTAGAAGCTTCCTCTTATCAGTATCTTCTATCTTCAAGCCAAGATTTTCAAAACCTTGTTAATGCTCACAAGGAAACTGCTGGTTCTGAAAGGCTTCCTGATGTTACTTCTCATACACATGCAAATCCCACCAAGGAGATTATCAAGTCATATTCAGAGAAGCAGTTTAAGGATACAAAAGGTGACCAATTGATTAAGCAAGAAGAAAGAGAAATTGGAGACACAGGGCTAAAGCCTTACTTGCAATATCTGAATCAAAACAAGGGTTATTTGTACTTCTCTATTTCTGCACTTATGCACCTTGCATTTGTGATTGGTCAAGTACTACAGAACTCATGGATGGCTGCTAATGTTGACAATCCTCACGTTAGCACGTTGAAATTGATAGCGGTCTACTTGTTCATTGGAGTTGTTTCAACCCTTTTCTTGCTAGTTAGAACTCTGGGGATTGTTGCTTTAGGCATTCAATCGTCAAAGTCTTTGTTTTCACAGCTGCTGGACTCACTTATCCATGCGCCTATGTCATTTTACGACTCCACACCTTTGGGAAGGATACTTAGTAGGGTCTCATCCGATTTGAGCATCGTCGATCTTGATGTTCCATTCAACCTCATGTTTGCCGTTGGAGCCACCACAAATTGTTATGCTAACCTTGTTGTTCTGGCGGTTGTTACCTGGCAAGTCTTGTTTGTCTCTATACCAATGGTTTATGTAGCAATTTGTCTGCAGAGATACTACTTTGCCTCTGCAAAAGAGTTGATGCGATTGAATGGCACAACAAAGTCCTATGTAGCCAATCATCTGGCAGAATCTGTTGCTGGTGCTATGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTCTTCGCCAAGAATCTTCATTTAATCGATGTCAATGCCTCCCCTTTCTTCCATAACTTTACAGCAAATGAGTGGTTGATTCAACGGTTGGAAACAGTTAGTGCTTGTGTTCTTGTCGCCGCAGCACTTTGCATGGTACTACTTCCACCTGGGACTTTCTCCTCTGGATTTATTGGCATGGCCATTTCTTATGGGCTTTCATTAAATGCATCCCTTGTGTTCTCAATTCAGAACCAATGCACAACAGCAAACTATATAATATCAGTAGAAAGGTTGAATCAATACATGCATTTACCAAGTGAAGCTCCAGAAGTCATAGAAGAAAATCGTCCTCCTGCAAATTGGCCTGTGGTTGGAAAAGTAGAAATAAATAATCTGCAGATAAGGTATAGGCCTGATACACCTCTTGTACTGCGAGGAATCTCATGCACATTTGAAGGAGGGCACAAGATTGGCATTGTTGGGAGGACAGGTAGTGGAAAGTCCACTCTCATAGGCGCTTTGTTTCGCCTCGTGGAGCCAGCTGGTGGAAAGATCATTGTCGATAGCATAGACATTTGTAGTATTGGCCTCCATGATTTGAGATCGCGTTTCGGTGTCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTTAGATATAACTTGGACCCTTTGTCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGAAAATGTCAATTGCGAGAGGCAGTTCAAGAGAAAGAAGGCGGCTTAGACTCTTCAGTTGTGGAAGATGGATCAAACTGGAGCATGGGACAGAGGCAGCTATTCTGCTTGGGACGAGCTCTTCTAAGGAGAAGTCGGATTTTGGTGCTCGATGAAGCAACTGCATCAATCGATAATGCCACCGATTTGATTCTGCAGAAAACTATAAGGAGTGAGTTTGCAGATTGCACTGTGATCACAGTAGCTCACAGGATACCAACAGTGATGGATTGCACTAAAGTTCTTTCCATAAGCGATGGAAAGTTGGTGGAATATGATGAGCCAATGAAGTTGATGAAGAGGGAAGATTCTTTGTTTGGGCAGCTTGTGAAGGAATATTGGTCTCATCTTCATTCTGCAGAATCATGTTGA 4440 0.4113 MEEFWRVFCEESSCSERGGIHCSYDFELLKDPSTCMNHLMVICLNVLLLILLLLTVTLKSSTKTFHGSVQAQRFSSLQVASAIVSGCLGLIHLCLGIWILEEKLRKTHTAFPSHWWILEISQGITWLCVGLTISLKLTKLSKLWSRLVSILLLLISGIFCVISICFVIGGREVSLKIALDVLPVPGAILLVICSYKGRPFVERNIDGSLYAPLNGESTDIDKTSSADHVTPFAKAGFFSKMSFWWLNPLMKMGKEKAIQEEDIPKLREEDQAESCYLVFLDQLNRQKQKEPSSQSSIFWTIILCHWKDIFISGIFALLKVLTISAGPLLLNSFILVAEGKESFKYEGYILAITLFFTKILESVSQRQWYFRSRLIGLRVRSLLSAAIYKKQLRLCNASRLMHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSVQLCIAIVILFNAVGLATIASLVVIVLTVLCNTPLAKLQHTFQTKLMVAQDERLKASSEALVNMKVLKLYAWETHFKKAIESLRKVELKFLTSVQLRRAYNTFLFWSSPVLVSAATFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSANARKKSLNGCLNGSIRINSANFSWEDNDSKPTLRNINLDVKPGQKVAICGEVGSGKSTLLASILGEVPKTHGTIEVHGKFAYVSQTAWIQTGTIRDNILFGSAMDAQRYQETLERSSLVKDLALFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTASNLFSEYVMEALREKTVMLVTHQVDFLPAFDSILLMCDGEILEASSYQYLLSSSQDFQNLVNAHKETAGSERLPDVTSHTHANPTKEIIKSYSEKQFKDTKGDQLIKQEEREIGDTGLKPYLQYLNQNKGYLYFSISALMHLAFVIGQVLQNSWMAANVDNPHVSTLKLIAVYLFIGVVSTLFLLVRTLGIVALGIQSSKSLFSQLLDSLIHAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFNLMFAVGATTNCYANLVVLAVVTWQVLFVSIPMVYVAICLQRYYFASAKELMRLNGTTKSYVANHLAESVAGAMTIRAFEEEDRFFAKNLHLIDVNASPFFHNFTANEWLIQRLETVSACVLVAAALCMVLLPPGTFSSGFIGMAISYGLSLNASLVFSIQNQCTTANYIISVERLNQYMHLPSEAPEVIEENRPPANWPVVGKVEINNLQIRYRPDTPLVLRGISCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDSIDICSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREAVQEKEGGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPMKLMKREDSLFGQLVKEYWSHLHSAESC 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3346g00009 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 848 IPR003439 GO:0005524
Pral3346g00009 1479 Gene3D - 1216 1468 IPR027417 -
Pral3346g00009 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1467 - -
Pral3346g00009 1479 SUPERFAMILY ABC transporter transmembrane region 906 1213 IPR036640 GO:0005524|GO:0016020
Pral3346g00009 1479 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Pral3346g00009 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1233 1467 IPR003439 GO:0005524
Pral3346g00009 1479 Pfam ABC transporter 1250 1398 IPR003439 GO:0005524
Pral3346g00009 1479 CDD ABCC_MRP_domain2 1231 1451 - -
Pral3346g00009 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1464 IPR027417 -
Pral3346g00009 1479 SMART AAA_5 1259 1451 IPR003593 GO:0016887
Pral3346g00009 1479 SMART AAA_5 652 825 IPR003593 GO:0016887
Pral3346g00009 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 848 IPR027417 -
Pral3346g00009 1479 FunFam ABC transporter C family member 10 608 861 - -
Pral3346g00009 1479 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Pral3346g00009 1479 CDD ABC_6TM_ABCC_D2 919 1208 IPR044726 GO:0140359
Pral3346g00009 1479 FunFam ABC transporter C family member 5 882 1214 - -
Pral3346g00009 1479 Gene3D - 620 854 IPR027417 -
Pral3346g00009 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1196 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3346g00009 1479 FunFam ABC transporter C family member 10 293 606 - -
Pral3346g00009 1479 CDD ABC_6TM_ABCC_D1 311 598 IPR044746 GO:0140359
Pral3346g00009 1479 Pfam ABC transporter transmembrane region 925 1176 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3346g00009 1479 Pfam ABC transporter transmembrane region 309 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3346g00009 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 310 590 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3346g00009 1479 Gene3D ABC transporter type 1, transmembrane domain 880 1214 IPR036640 GO:0005524|GO:0016020
Pral3346g00009 1479 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016020
Pral3346g00009 1479 FunFam ABC transporter C family member 3 1216 1468 - -
Pral3346g00009 1479 CDD ABCC_MRP_domain1 625 825 - -
Pral3346g00009 1479 SUPERFAMILY ABC transporter transmembrane region 298 603 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3346g00009 Pral-Chr3346 296311 312609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3346g00009 621 841 Calmodulin-binding Proteins AT2G36910 30.932 9.58e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3346g00009 K05666 - gmx:100811468 2279.6