Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3346g00001 ATGCATTCGCTCTATCCCTGTTTCTTGTGGGTCTGTTTCTTTTTCTTTATTGCCTTCAATTTTCCCTCACTTTCTTTCTCTTTCTTGCCCTCACAAAACGTAACCCTCTTAGGTGACGCCTATTTCGGAAATAAGGCCATTAGTCTCACCCAAGAACTCAGCTGTCACCACCATTCTTCTTCATCTTCTTCTTCTTCTGGGGTTGGAAGAGCTTTCTATGTAAACCCAGTTCGATTTCTTGATTCTGAAACGAACTCTACAGCTTCTTTCTCTTGCCGCTTCACTTTTTCAATTGTCTCTTCCCCTTCGTGTCATTCTGGTGATGGCATTGCCTTCATGATCATCTCCAATACCGACTTGGTCAGCTTCTCTCGTGGCTATATGGGTCTCCCATCTCTATCTATAAATCAGCAAGATTCTTATTTTGCTGTGGAATTTGACACCAATTTTGACCCTGCAGTGGGTGACATTAATGGGAATCACATCGGTATTGATGTTGATACAATCATATCTATCGCCTCAGTGGATGCTATTTCTGAGGGAATTGATCTGAAGAGTGGGAGAAAAATTACGGCTTGGATTGAGTACAGAGATGCCCAGAAAATGGTTCGTGTATGGGTGGGTCACTCTCCAGCTCGGCCTCAAACTCCTATTTTGGTTGCTCAGATTGACCTCTCTGAGAAACTTAAGGAGTTTATGCATGTGGGTTTCTCTGCCTCCAATGTGATGGGCTCAGGTATTCATTCTATCGATCATTGGCAATTCAAAACTTTTGGGTTTATTAGTTCAGTGAATCCGATAGATATGGTAGAGGAAGGAGACTGTTTCTTTTGTTATCCAGAGAATTCTACCATAGCTACTCACCAGATTGATAATACTTACTATAGAAGAGAAAAGCTAGGGGACATGGCTCTTGGGTTGGGAGGCATTGCTGCATTTATAGTCTCTGCATTTTTAATCTGCATATTCTTGGTTAAGAGAAAAAAGGCAAGTGTTGGAGATCCTTTGAGAGAAGATCAACATTGTGAATTCCAATCCACAAAACTCCCCTCAAGATTGTCTCTCTCTGAAATCAAATCAGCAACAATGGGATTCAGCAGAGACAGACTTGTTGGGGAAGGAACATCGGCAAAAGTCTATAAAGGGTCTCTTCCATATGGAGGAGATGTTGCTGTGAAAAGATTTGGGAAGGTTAATGGCTGTAATAGCATAGACTATTTGCACAATCCTTTTACCAATGAGTTTGCCACCATGGCTGGCTGCTTAAGGCACAAGAACTTGGTTCAGCTTCAAGGATGGTGCTGTGAAGGGTCTGAGTTAGTTCTTGTCTATGAGTACCTGCCTAATGGTAGCCTCAACAGAATCCTACACAAGAACTACAATTCTTCAGTGGTTCTTTCATGGAAACAAAGGGTGAACATAATTCTGGGGGTTGCTTCTGCCCTCACCTATCTTCATGAAGAGTGTGAGAGGCAAATCATTCACAGAGATGTGAAGACCTGCAATATAATGCTCGATGCAGATTTCAATGCCAAGCTTGGGGATTTTGGACTGGCAGAAGTCTATGAGCATAGTTGTGATACAAGAGAAGCTACTTTGCCTGCAGGAACAATGGGTTACCTTGCACCTGAATATGTATATTCAGGTGTTCCAACTGTGAAGACTGATGTGTACAGCTTTGGCATAGTGATGCTAGAAGTGGCTACTGGGAGGAAACCGGTGGAAGATGATGGAACTGTTATTGTAGATTACACATGGAAGATGTGGGAAAAGAGAAACCTGGTTGAAGCTGGAGATCCAAGATTGATGGGGAAGTTTGATGTGCAAGAGATGGAGAGGATGCTCATGGTGGGGCTTATATGCGTGCATCCAGACCATGAGAACAGGCCAAGAGTGAGAGATGCAGTTAGGATTCTCAAGGGTGAAGCACCGCTTCCATTTTTACCTGCATGTAAACCAAGGGTGAGAATTAGGCCTGTCTTACCAAATGATACTGATGAAATATTGGATGTTATAGGAAACAGACCCAGTACTGATGAGGCTTCCTATTTGACCCCAAGGAGCCGCTTTAACTGA 2076 0.4292 MHSLYPCFLWVCFFFFIAFNFPSLSFSFLPSQNVTLLGDAYFGNKAISLTQELSCHHHSSSSSSSSGVGRAFYVNPVRFLDSETNSTASFSCRFTFSIVSSPSCHSGDGIAFMIISNTDLVSFSRGYMGLPSLSINQQDSYFAVEFDTNFDPAVGDINGNHIGIDVDTIISIASVDAISEGIDLKSGRKITAWIEYRDAQKMVRVWVGHSPARPQTPILVAQIDLSEKLKEFMHVGFSASNVMGSGIHSIDHWQFKTFGFISSVNPIDMVEEGDCFFCYPENSTIATHQIDNTYYRREKLGDMALGLGGIAAFIVSAFLICIFLVKRKKASVGDPLREDQHCEFQSTKLPSRLSLSEIKSATMGFSRDRLVGEGTSAKVYKGSLPYGGDVAVKRFGKVNGCNSIDYLHNPFTNEFATMAGCLRHKNLVQLQGWCCEGSELVLVYEYLPNGSLNRILHKNYNSSVVLSWKQRVNIILGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSCDTREATLPAGTMGYLAPEYVYSGVPTVKTDVYSFGIVMLEVATGRKPVEDDGTVIVDYTWKMWEKRNLVEAGDPRLMGKFDVQEMERMLMVGLICVHPDHENRPRVRDAVRILKGEAPLPFLPACKPRVRIRPVLPNDTDEILDVIGNRPSTDEASYLTPRSRFN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3346g00001 691 Pfam Legume lectin domain 19 257 IPR001220 GO:0030246
Pral3346g00001 691 CDD STKc_IRAK 371 641 - -
Pral3346g00001 691 SUPERFAMILY Protein kinase-like (PK-like) 344 639 IPR011009 -
Pral3346g00001 691 PANTHER - 55 646 - -
Pral3346g00001 691 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Pral3346g00001 691 Pfam Protein kinase domain 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3346g00001 691 FunFam L-type lectin-domain containing receptor kinase S.6 328 446 - -
Pral3346g00001 691 FunFam L-type lectin-domain containing receptor kinase VIII.1 447 657 - -
Pral3346g00001 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 257 IPR013320 -
Pral3346g00001 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Pral3346g00001 691 Gene3D Phosphorylase Kinase; domain 1 328 446 - -
Pral3346g00001 691 Gene3D - 17 264 - -
Pral3346g00001 691 Gene3D Transferase(Phosphotransferase) domain 1 447 644 - -
Pral3346g00001 691 CDD lectin_legume_LecRK_Arcelin_ConA 24 259 IPR001220 GO:0030246
Pral3346g00001 691 ProSiteProfiles Protein kinase domain profile. 365 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3346g00001 691 SMART serkin_6 365 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3346g00001 Pral-Chr3346 94342 96598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3346g00001 13 691 Receptor kinase-like Gene Family AT5G42120 54.571 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral3346g00001 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3346g00001 - - qsa:O6P43_008119 972.23