Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3342g00003 ATGGCGATGGCGATGGCGAAACAGCTTTGCCATTTTCACCATTTCTTCTTCGTTTTGCTCTTCTTTCTTGCCACCCGCCGTACACATCAGTTACAACATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTACCCATCAGCTCTAAGCAGCTTGAGAAGTACGAGAGATTTCTGCAACATCGAGCCCACCAGCTATTTGACAATAGTCTGCTATGAGGACAATGTAACGCAGCTTCATGTTGTTGGTGATAGTGGGCTTTCTCCTTTGCCTCAAAATTTCTCTTCAGACTCTCTGTTTGCCACTTTGGGCACTCTTTCGAGCTTGAAAGTACTTTCTCTGGTTTCTATGGGTGTCTGGGGTCCCATACCTGAAAGCATTTCTCAACTGTCTTCTCTGGAGATTCTCAACATTAGCTCAAATCATTTTAGTGGAGCCATCCCAAACCAACTTTCTCTGTTGAAGAATCTGCAATCGTTGGTTCTTGGTGATAACGATTTCACAGGTGAAATTCCCACGTGGATAGGTTCGCTTCAAGGTTTAGCTGTGCTGAGTATGAGAAGAAATTTTCTTAGTGGGTCTGTACCAACTTCAGTTAATGATCTCCAAACTCTGAGGGTGCTGGATCTATCAAATAATCATTTACAAGGTGAACTGCCCGGCCTTAGTAATTTGAAAAATTTACAAGTTCTTAATCTGGAAAACAACACACTGGGACCCCATTTTCCTTCTCTACCCACCAAGTTAGTTTCATTAGTGCTTAGAAATAACAGCTTCCGGTCTGGTATACCTTCAAACTTAAGCTCTTACTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTTGTGGGACCATTCATACCGTCTTTACTTTCTCTGCCTTCCATCAAATACCTGGATGTTTCAACAAATAAATTTACTGGGATGCTATTCAGTAATTATTCTTGCAATTCTAATATCCTTTTTGTGAATCTATCCTCAAATCTCTTGAAAGGAGAACTTCCCAGTTGTTTGAAAGCAGAGAACGAAGTGGTTGCTTTGTATGCTAGGAATTGTTTTTCAAATGAGGATCAACATCAGCACCCTCCCACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTAATGCCTCATGAACAGAAGCAGAGAAAAAGAACAACTGGTAAAGCGGTTCTTGTATCAAGCATGGGAGGAATTGTTGGAGGAGCCCTTGTTTTTGGAGTGGTTTTTTTGGTCGTTGCACGAGTAAACAAAAAGGGCTCTGTGAAAGCACCTGAAGGATCAACATTGGAGCAAGTTAAAAGCCAGATGAGTGAAAAGGATGATGAAGCTAAAACTCCCAGAACTGTTCTATCAGTAATGGAGAATATCATCAGCCGAGTCCCTAAGCCTAACAAGGAATCTGTGAGAACAATTGCACGATCGATGATGGAGCAAGTTGTTAACAGGGTTCATCACAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCACGCCTCATCAGTGAACACAGCAAAACTGCTCACGGATGCAAGGTATATCTCCCAAACGATGAAGATGGGTACCAGCCTTCCTGCTTATAGGACGTTTGCTTTGGATGAACTCAAGGAGGCCACAAACAATTTTGATGCATCATGTTTTATAAGTGAAGGTGCGCGTGGTCAGATCTACAAAGGGTCACTCTCTGATGGAACTCAGATTGCTGTAAGAAGTTTGAAAATGAAGAAAAGACATGGCCCTCAGAGCTATATGCATCACATTGAATTGATTTCGAAACTGAGGCACCCACACTTGGTCAGTGCTCTAGGACATTGCTTTGAGTGCAACAACGATGATCCAAGTGTCAGCAGTATATATCTCATATTTGAGTTTGCACCATATAAAAGTTTAAGAGGCTGCATATCCGGACCTTCTGGAGCAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGAGTTGTTAAAGGCATTCAATTTTTGCACACTGGGACAGTGCCTGGATTGTACTCAAATAATCTGAAGATAACAGATATTCTACTGGATAACAATCTCAATGTCAAAATATGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGACCGTGGTGGGGAATGGAACTTTTTCCTCTGTAGTTAAAGGAAATGTTCAAGCAAGGACAAAGGATGGCGATAAAAATGATGTCTACGATTTTGGTGTAATCTTACTTGAAATCATTCTAGGACGTACAATCCTGTTCCATAATGAAGTTGGAACACTAAAGGATCTCTTACAAGTAAGCCTAGCAACTGATGATATAGCTAGAAGGAGCATTGTTGATCCAGTAATTCATAAGCAATGTTCAGATGAATCAATGAAGAGGATGATGGAGTTATGTGTGAGATGCGTCTCAGAAGATCCTACTGATAGACCTTCTGTGGAAGATGCTCTCTGGAATCTGCAGTTTGCGGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATACTGGAGAATCACCTGCTTCACCTGCCCAAGAAACACAAAGTTCCTAA 2550 0.4184 MAMAMAKQLCHFHHFFFVLLFFLATRRTHQLQHSQSYALLKFQKLLGYPSALSSLRSTRDFCNIEPTSYLTIVCYEDNVTQLHVVGDSGLSPLPQNFSSDSLFATLGTLSSLKVLSLVSMGVWGPIPESISQLSSLEILNISSNHFSGAIPNQLSLLKNLQSLVLGDNDFTGEIPTWIGSLQGLAVLSMRRNFLSGSVPTSVNDLQTLRVLDLSNNHLQGELPGLSNLKNLQVLNLENNTLGPHFPSLPTKLVSLVLRNNSFRSGIPSNLSSYYQLQKLDLSLNGFVGPFIPSLLSLPSIKYLDVSTNKFTGMLFSNYSCNSNILFVNLSSNLLKGELPSCLKAENEVVALYARNCFSNEDQHQHPPTFCQTEALAVNVMPHEQKQRKRTTGKAVLVSSMGGIVGGALVFGVVFLVVARVNKKGSVKAPEGSTLEQVKSQMSEKDDEAKTPRTVLSVMENIISRVPKPNKESVRTIARSMMEQVVNRVHHRHVRPARSIVEHASSVNTAKLLTDARYISQTMKMGTSLPAYRTFALDELKEATNNFDASCFISEGARGQIYKGSLSDGTQIAVRSLKMKKRHGPQSYMHHIELISKLRHPHLVSALGHCFECNNDDPSVSSIYLIFEFAPYKSLRGCISGPSGAKLSWAQRIAAAIGVVKGIQFLHTGTVPGLYSNNLKITDILLDNNLNVKICSYNLPLLAENKTVVGNGTFSSVVKGNVQARTKDGDKNDVYDFGVILLEIILGRTILFHNEVGTLKDLLQVSLATDDIARRSIVDPVIHKQCSDESMKRMMELCVRCVSEDPTDRPSVEDALWNLQFAAQVQNSWGRDSIDTGESPASPAQETQSS 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3342g00003 849 Gene3D Ribonuclease Inhibitor 153 247 IPR032675 -
Pral3342g00003 849 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 103 198 - -
Pral3342g00003 849 SUPERFAMILY Protein kinase-like (PK-like) 524 820 IPR011009 -
Pral3342g00003 849 Gene3D Ribonuclease Inhibitor 248 365 IPR032675 -
Pral3342g00003 849 MobiDBLite consensus disorder prediction 427 450 - -
Pral3342g00003 849 Gene3D Ribonuclease Inhibitor 34 152 IPR032675 -
Pral3342g00003 849 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3342g00003 849 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 65 830 - -
Pral3342g00003 849 Gene3D Phosphorylase Kinase; domain 1 517 623 - -
Pral3342g00003 849 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 630 834 - -
Pral3342g00003 849 MobiDBLite consensus disorder prediction 829 849 - -
Pral3342g00003 849 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 250 375 - -
Pral3342g00003 849 SUPERFAMILY RNI-like 96 344 - -
Pral3342g00003 849 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Pral3342g00003 849 Pfam Leucine Rich repeats (2 copies) 207 241 IPR025875 -
Pral3342g00003 849 Gene3D Transferase(Phosphotransferase) domain 1 631 835 - -
Pral3342g00003 849 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 520 628 - -
Pral3342g00003 849 Pfam Protein tyrosine and serine/threonine kinase 552 813 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3342g00003 Pral-Chr3342 62507 67798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3342g00003 497 832 Miscellaneous Gene Families AT3G03770 60.059 7.23e-133 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral3342g00003 PK_Tyr_Ser-Thr 8.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3342g00003 - - gmx:100797327 1130.16