Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3336g00002 ATGGATGAACACTTGGGGATTTTGAAAGTCATCGTTGTGCAAGGAAAACGATTAGTGATTCGGGATTTCAAGAGTAGCGATCCTTATGTTGTGGTAAAGCTAGGAAATCAGACAGCAAAGACTAAGGTGATTAATAGTTGCTTGAGCCCTGTTTGGAATGAAGAGCTTAGTTTCACTCTGACAGAACCTGTGGGAGTTCTAAATTTGGAAGTGTTCGATAAGGATCTTTTGAAGAGTGATGACAAGATGGGAAATGCCTTCCTCAACCTTCAACCACTATTCTCTGCAGCTAGAATAAGAGACGTTTTACGGGCTTCCTCCGGTGAAACAACAATAAGGAAGCTCGTACCCGACAGCGAAAACTGCCTCGTTCGCGAAAGCAGCATCAACAGTGTTAATGGCGAACTGGTGCAAAACGTTTGGTTACGGCTTCGGGGAGTTGAGTCTGGTGAGCTTGAGTTGACAATCAAGTTCATCACTCCGACCACTCCCTCAGCATAA 501 0.4451 MDEHLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLSPVWNEELSFTLTEPVGVLNLEVFDKDLLKSDDKMGNAFLNLQPLFSAARIRDVLRASSGETTIRKLVPDSENCLVRESSINSVNGELVQNVWLRLRGVESGELELTIKFITPTTPSA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3336g00002 166 Gene3D C2 domain 3 163 IPR035892 -
Pral3336g00002 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 160 IPR044562 -
Pral3336g00002 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pral3336g00002 166 CDD C2_ArfGAP 5 150 - -
Pral3336g00002 166 SMART C2_3c 7 102 IPR000008 -
Pral3336g00002 166 Pfam C2 domain 6 99 IPR000008 -
Pral3336g00002 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3336g00002 Pral-Chr3336 87321 90830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3336g00002 1 159 C2H2 Transcription Factor Family AT4G05330 42.767 2.41e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3336g00002 - - pcin:129304892 313.538