Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3335g00001 ATGAGAGAGAAGTCAATGGAGCTGAAGTTACTGATCTTGTTCCTTCTTTTAGTTGCAGCCATGGAAGCTGCAATATCAGAAGCTAAATCCCTTAAAGGCTGCCTCAAGAAATGTGGGGAAGTAGAGATTCCATATCCATTTGGTGTGGGGGACAACTGCTCCTTGGAGAAGCCATTTAATCTCACCTGTGACACTTCTACATCCACATTATTCTACGGAAAAAACCCAGTTTCAAGCATATCTGTCCAACATGGTCTTATGGACGTTTTGTTTGAAGTCTCCAAGATTTGTGGTAATCAATCAGAAGAAAAACATCCTCGTCTTCTTGACGCTGGCCATTATTTCACCATTTCCACCTCGGAGAACATGTTCGTAAGTGTTGGTTGTAACATTCTAGGTAGGATTTGTAGTCATCATGAAGGCCAATCTACTAATTTTGGAGGCTGCTTAGCAATCTGTGATCAACTGCCAAAAAATAATAATACTTGTGCTGGGACTGGGTGTTGCCATGGGGAAATTCCTCCTCAAGGAAAGCCTTCAACATATGATTTTCAGGCAACTCGCGCCTTCTCCAATTATAAGGTATCAAATGGAAATAATTGTAGCTATGCCTTTGTAGCTAAAAATGGTTGGTTCAGTTTCTCCCCTCATCATTTACTGAACTTTCCTTTTGAGGTGACCCCAGTTGTGCTAGATTGGACTGTTTCAAATGTTAGCTGCCAAAATGGTTCCAGTCCATACTGTGCCTGCAAAAACAACACATACCATGTGGACTATTACTCCAACGCTGGTCATCGGTACAAATGCAAATGCAAACCTGGTTTTGAGGGAAATCCATACTATTTGGATGGATGTCAAGATGTTGATGAGTGCACAAGACCCAATAACTGCAGTATGCCAAAGCGATGCCACAATTTGGAAGGTGGCTACCATTGTTCTTGTCCACCTGCACATAAAGGTGATGGCAAAGCTAACGGATCAGGCTGCACTCTCGACTATGGGTTCATAGCATTATCTTGTAGTGCTTCTTTGCTTATTGTTTTCATACTAGTCTACACATCATGTTGGACATACAAGCAAAGAACTTTGAAACAAGTCAGAAGAAGAAACTTTGAGCAAAATGGAGGAAACATGTTGCAACAACAAATTTCACAACAGCAGGCATATAGTGGCAAAACCAAGTTATTTACTGAAGCTGAGCTTAAAAATGCCACAAACAACTTTCATAAAGATACAATTCTTGGTCATGGAGGACAAGGCATAGTTTACAAGGGGATATTATCAGACAAAACACCTATTGCCATTAAGAAACCTAGACAAGGAGGAGACCCTCAACAAATTAAAGATTTTATCAATGAAGTGTGTGTGCTTTCCCAAATCAACCACAGGAATGTGGTCAAACTATTGGGATGTTGTCTTGAAACTGAAGTTCCTTTATTAGTTTACGAGTTTGTGAACAATGGTACCCTTCTAGACCATATAGACCCATTAAAGAATGATGGCTCTATTATGTGGGAGACTCGGTTAAGAATCGCTGCGGAAATTGCTGGGGCAATTGCATATTTGCACTCTTATGCTTCTATTCCAATCATTCACCGAGATATCAAATCTGCCAACATACTTTTGGATCATAATCTTAGGGCAAAGGTGTCTGATTTTGGATCATCAAGACTTATTCCACTTGATGCAACACATGTTACTACTATCGTACAAGGGACTCTTGGATACTTGGATCCAGAATACCTTCACATTGGAGAGTTGAATGAGAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTGTGGAACTACTCACAGGAAGAAAAGCAATTAAATTTAGTAGGCCTGAACAAAGAAATTTGGCAATGTACTTTGTGTCTTCAATGAAAGAAAATCACTTGTGGGAAATTCTTGATAAGAGGGTGTTAGAACAAAAGAATGCAAAACAACTAAAAGAAGTAGCTTCACTGGCAAGGAGATGTTTAAGAGTTAAAGGAGAGGAAAGGCCTACTATGAGGGAAGTGGCAATGGACTTAGAGGGTCTAATTTCCATGGGAAAGCATACCTGGGGTAAGGACAAGGGTATAGTGGCAGAAGAAAGTGAATATTTACTTGGTCATGTTCCTGAAGGATATGACGATGCTAGTTCTAGCATCATTGTTTCAGTTACTAGTTATGATGGCATACAAAGCCAATCGTCACCTGAAATTATAGGCGGACGATGA 2223 0.4004 MREKSMELKLLILFLLLVAAMEAAISEAKSLKGCLKKCGEVEIPYPFGVGDNCSLEKPFNLTCDTSTSTLFYGKNPVSSISVQHGLMDVLFEVSKICGNQSEEKHPRLLDAGHYFTISTSENMFVSVGCNILGRICSHHEGQSTNFGGCLAICDQLPKNNNTCAGTGCCHGEIPPQGKPSTYDFQATRAFSNYKVSNGNNCSYAFVAKNGWFSFSPHHLLNFPFEVTPVVLDWTVSNVSCQNGSSPYCACKNNTYHVDYYSNAGHRYKCKCKPGFEGNPYYLDGCQDVDECTRPNNCSMPKRCHNLEGGYHCSCPPAHKGDGKANGSGCTLDYGFIALSCSASLLIVFILVYTSCWTYKQRTLKQVRRRNFEQNGGNMLQQQISQQQAYSGKTKLFTEAELKNATNNFHKDTILGHGGQGIVYKGILSDKTPIAIKKPRQGGDPQQIKDFINEVCVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLLDHIDPLKNDGSIMWETRLRIAAEIAGAIAYLHSYASIPIIHRDIKSANILLDHNLRAKVSDFGSSRLIPLDATHVTTIVQGTLGYLDPEYLHIGELNEKSDVYSFGVVLVELLTGRKAIKFSRPEQRNLAMYFVSSMKENHLWEILDKRVLEQKNAKQLKEVASLARRCLRVKGEERPTMREVAMDLEGLISMGKHTWGKDKGIVAEESEYLLGHVPEGYDDASSSIIVSVTSYDGIQSQSSPEIIGGR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3335g00001 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Pral3335g00001 740 CDD EGF_CA 287 321 - -
Pral3335g00001 740 SUPERFAMILY EGF/Laminin 286 321 - -
Pral3335g00001 740 FunFam Fibrillin 2 282 325 - -
Pral3335g00001 740 FunFam Wall-associated receptor kinase 2 378 484 - -
Pral3335g00001 740 ProSiteProfiles EGF-like domain profile. 287 321 IPR000742 -
Pral3335g00001 740 ProSitePatterns Calcium-binding EGF-like domain signature. 287 312 IPR018097 GO:0005509
Pral3335g00001 740 Gene3D Phosphorylase Kinase; domain 1 370 484 - -
Pral3335g00001 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 681 IPR045274 GO:0007166
Pral3335g00001 740 Coils Coil 639 659 - -
Pral3335g00001 740 Pfam Protein tyrosine and serine/threonine kinase 410 677 IPR001245 GO:0004672|GO:0006468
Pral3335g00001 740 FunFam Wall-associated receptor kinase 2 485 701 - -
Pral3335g00001 740 ProSiteProfiles Protein kinase domain profile. 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3335g00001 740 SMART egfca_6 287 330 IPR001881 GO:0005509
Pral3335g00001 740 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
Pral3335g00001 740 SUPERFAMILY Protein kinase-like (PK-like) 387 678 IPR011009 -
Pral3335g00001 740 Gene3D Laminin 239 323 - -
Pral3335g00001 740 Pfam Wall-associated receptor kinase galacturonan-binding 34 85 IPR025287 GO:0030247
Pral3335g00001 740 SMART serkin_6 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3335g00001 740 CDD STKc_IRAK 414 681 - -
Pral3335g00001 740 Gene3D Transferase(Phosphotransferase) domain 1 485 695 - -
Pral3335g00001 740 SMART egf_5 239 286 IPR000742 -
Pral3335g00001 740 SMART egf_5 290 330 IPR000742 -
Pral3335g00001 740 Pfam Calcium-binding EGF domain 287 322 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3335g00001 Pral-Chr3335 18551 22094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3335g00001 6 740 Receptor kinase-like Gene Family AT1G21230 42.951 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral3335g00001 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3335g00001 - - pcin:129293718 861.292