Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3332g00002 ATGGACTCAAAAACTAGTGCTGGAGCTGCCTCCAAACAGCATCATAAGATAGCTGCTGAACAAACAGTAGAGGCAAAAGACATCCAGCCTTCTCCATCTCTGGTTTCAAAATTAGGTAAACTTGAACTGGGTACTCTTGAAAGTTCATCAAAATCCGTGCAGAGCACATCGAAGCAGAACATTGGAGAAACTTCTGAAAGCAAGAAGGCTGGAATTTTAAACCAAAAGGGGCTTGCCGAGTCCTTAAGTAATAAATGTGGTTCTGTTGCTTTCTCATCTGTCCTTAGGCAGGCATGTGGAGGAGTTGACCATGCTATTAATGAAAATAGGGGGTCGCAGGATAGTTCTATTGATCAAGAAAAGAAAACATCAGAGTATGGAAGTGTGAAGAACAGCTCTGTTTCAGCTAAAGTTAGTGATGGGGCAAGCAGTTTTGGAAAGACCAGTGTAAGTGCCAAAGTCAGTGATCGAGCTGATTATGTTGAGAGTGGGAAGAGCAGTATCTGCAGAGGAAGCACAAGCAGTGATGTCAGTGATGAGAGTACTTGTAGCAGCTTTAGTAGTAGCATAAACAAACCTCACAAGGCAAATGACTTGAGATGGGAAGCCATCCAAGCTGTTCGAGCTAGAGACGGGATGCTGGGTTTAGGTCACTTTAGACTACTGAAGAAGTTGGGCTGTGGGGATATTGGGAGTGTGTACCTCTCAGAGTTGACTGGAACTAAATGCTATTTTGCAATGAAGGTAATGGACAAAGCATCACTAGCAAGTCGTAAGAAGTTGCTTCGTGCTCAGACTGAAAGGGAAATACTGCAGTCACTGGACCATCCTTTTCTTCCAACATTGTATACTCATTTCGAGACAGACAAGTTCTCATGCTTGGTGATGGAATTCTGCCCTGGTGGAGACTTGCATACACTTAGGCAGAAACAACCAGGAAAGCATTTTACTGAGCAAGCAGTAAAGTTTTATGTAGCTGAAGTCTTGCTTGCTTTGGAATACCTCCACATGCTTGGAATTGTCTATCGTGACCTCAAGCCAGAAAATGTCCTTGTGAGGGATGATGGACATATTATGCTCTCGGACTTTGATCTTTCCCTCCGTTGTGCTGTTAGTCCAACTCTCGTTAAAACCAATTCAGCAGAATCAGAGCCTTTAAGAAAGAATCCTAATTATTGTGTCCAGCCAACTTGTATTGAGCCTCCTTCCTGCATCCAGCCATCTTGTGTTGCTCCCACGACATGCTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAGGATAGGAAACCTAAGACTGAAATTGGAAACCAAGTGACTCCATTACCTGAGCTCATTGCGGAGCCTACAGATGCTCGTTCTATGTCCTTTGTTGGAACCCATGAGTATTTGGCACCTGAGATTATAAAGGGTGAAGGTCATGGGAGCGCAGTTGATTGGTGGACTTTCGGAATCTTTCTATATGAACTGTTGTTTGGTAAAACCCCTTTTAAGGGATCTGGGAACCGAGCTACGTTGTTTAATGTTGTAGGCCAGCCTCTCCGATTTCCAGACTCACCTGTCGTGAGTTTCGCTGCTAGGGATCTTATGAGGGGTTTGCTCGTAAAAGAACCACAACACAGGTTGGCATATAAACGTGGGGCTACTGAGATAAAGCAACATCCCTTTTTTGAGGGTGTTAACTGGGCATTGATCCGTTGTGCTACGCCGCCAGAGATACCCAAGCCTGTAGAGTATGAGAAGATACCTTCCCCGGCATCTTCAGGCAGTGAAAAAGTGGTCCGTCACATGTCAATTCCTGATAAAGGTTCTGATAAATATCTTGAATTTGATTTCTTTTAG 1842 0.4403 MDSKTSAGAASKQHHKIAAEQTVEAKDIQPSPSLVSKLGKLELGTLESSSKSVQSTSKQNIGETSESKKAGILNQKGLAESLSNKCGSVAFSSVLRQACGGVDHAINENRGSQDSSIDQEKKTSEYGSVKNSSVSAKVSDGASSFGKTSVSAKVSDRADYVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRARDGMLGLGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQKQPGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTNSAESEPLRKNPNYCVQPTCIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPDSPVVSFAARDLMRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSGSEKVVRHMSIPDKGSDKYLEFDFF 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3332g00002 613 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Pral3332g00002 613 MobiDBLite consensus disorder prediction 106 133 - -
Pral3332g00002 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Pral3332g00002 613 SMART serkin_6 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3332g00002 613 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Pral3332g00002 613 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Pral3332g00002 613 MobiDBLite consensus disorder prediction 1 31 - -
Pral3332g00002 613 PANTHER FLIPPASE KINASE 1-RELATED 41 580 - -
Pral3332g00002 613 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3332g00002 613 Pfam Protein kinase domain 220 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3332g00002 613 ProSiteProfiles Protein kinase domain profile. 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3332g00002 613 MobiDBLite consensus disorder prediction 46 69 - -
Pral3332g00002 613 Gene3D Transferase(Phosphotransferase) domain 1 451 575 - -
Pral3332g00002 613 CDD STKc_phototropin_like 218 576 - -
Pral3332g00002 613 SUPERFAMILY Protein kinase-like (PK-like) 195 585 IPR011009 -
Pral3332g00002 613 Gene3D Transferase(Phosphotransferase) domain 1 303 378 - -
Pral3332g00002 613 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3332g00002 Pral-Chr3332 101383 106124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3332g00002 114 613 AGC Kinase Gene Family AT5G47750 83.499 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral3332g00002 Pkinase 3.2e-37 CL0016