Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3329g00005 ATGGACAACAATTATCATCAAGGCGATTTAACTGACATTTTCCGAGCAAGTAGTAGCGGGGGTGGCCGTGGCGGCGGCGGAGGTGGCGGCGGCTCATATGGTACTTCTTCAACATCAGAATTAGCTCCCCATGATCTCCCTTCTTCTTCATCGGAAAGTTGGCACCACCACCATCATCACCACCAGATGGATTTCTCTTCTGTAATAATGGAAGATTCTCACAGAGCCACCAACGTCTTCTGCGATCCCTTCTCGAACATATGCGTCTCCTGGTTTTCTGCTTCTTCTTCTCTTGTTTTGTCTCATCACCACAAGCTTGTTGAAGACGATATAAGAATAAGGCCTGCTTTAGCAGCCACAGCTTGTAACAATAATACCATATTCTCCAACATGATTCAGATCTCTCCCAGCAGTTTGAACAACGCCGCCGCCAAGTTACCACCACCACCAGTTTCGCCGTGTGATTCTTCTACTCCTCCGGTGAATATGGCCGCCGCCGCCGCCATGAATTCTTCGTCTTCATCGTCGTTGCCATCGCGGAGGGGAATTGAGCCTTCTTCTTCTTTGGTTTCTGCAGCAGTCAACATGAATATCACCGTGGACAACGCGGCGGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTATGTATACCTGCACCAGCAGCTGCAAATAGCAGACCAAGTAGTGGAGAAGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTACCCAAGGGGTTACTACAGATGCAGCAGTTCGAAGGGTTGTTCAGCTAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCTCTTGCCGGCTCAACAAGGTCTCAGCCTTCCAAGAACAACAACAACAACAACAGTGCTTCCAGTAATAAGAACAGCAACAATTCCGATCAAGTTTTGATTCGGCCGCCACCTCGAGACGGTGGCAGCATGAAGCCGAAGGATGAGGAGGAGGACGAGCAGCAGCAGCAGGAAGATCATCATCATCATCAGAGAGGGAAAAGCTCATCATCATCGGTGAAGGAGGAGATGGAGTTGGAGATGATGGGGGAGATAACAGAGATGAACCAGAATGAAGAACAAGAGCTTGAGAATCTGATGATGGAAGATGATACTAATAACAATAATGGATCATCAGAAGGTGGAGTGGGATACAAGCCATGTTTCAATGAAGAACATTGTCATCAGCATCATCATCATCATCAAAGAGAATCCAAAGCTTTAGATCCTTTCAATCTCTTTGACTGGTCATCGTCATCATCTGCATCAGCATCAGCAAATCATATTCACAGCACCACCACCACTTCCTTTGAAGAACCAACAAAGAGAGGATTATAA 1467 0.4744 MDNNYHQGDLTDIFRASSSGGGRGGGGGGGGSYGTSSTSELAPHDLPSSSSESWHHHHHHHQMDFSSVIMEDSHRATNVFCDPFSNICVSWFSASSSLVLSHHHKLVEDDIRIRPALAATACNNNTIFSNMIQISPSSLNNAAAKLPPPPVSPCDSSTPPVNMAAAAAMNSSSSSSLPSRRGIEPSSSLVSAAVNMNITVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNNNSASSNKNSNNSDQVLIRPPPRDGGSMKPKDEEEDEQQQQEDHHHHQRGKSSSSSVKEEMELEMMGEITEMNQNEEQELENLMMEDDTNNNNGSSEGGVGYKPCFNEEHCHQHHHHHQRESKALDPFNLFDWSSSSSASASANHIHSTTTTSFEEPTKRGL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3329g00005 488 SUPERFAMILY WRKY DNA-binding domain 243 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3329g00005 488 Coils Coil 384 412 - -
Pral3329g00005 488 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3329g00005 488 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 126 410 IPR044810 GO:0003700
Pral3329g00005 488 MobiDBLite consensus disorder prediction 461 488 - -
Pral3329g00005 488 FunFam probable WRKY transcription factor 14 218 299 - -
Pral3329g00005 488 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3329g00005 488 MobiDBLite consensus disorder prediction 351 386 - -
Pral3329g00005 488 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3329g00005 488 MobiDBLite consensus disorder prediction 289 343 - -
Pral3329g00005 488 MobiDBLite consensus disorder prediction 31 49 - -
Pral3329g00005 488 MobiDBLite consensus disorder prediction 1 57 - -
Pral3329g00005 488 Gene3D WRKY domain 218 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3329g00005 488 MobiDBLite consensus disorder prediction 262 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3329g00005 Pral-Chr3329 428542 432189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3329g00005 195 371 WRKY Transcription Factor Family AT2G34830 62.437 1.36e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3329g00005 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3329g00005 - - pcin:129305007 489.574