Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3319g00003 ATGGCAGAGATTGTGATCTCAATCGTGTCAAAGGTTGCAGAATACTTAGTGGCTCCGATTTCACATGGAGCTGCGTATTTTTTCTGCTTTAAGCAGCTTAATGAAGACTTCAAGAAAGCAAAACAAGAGCTAGAGGTGAAACTAGAAGATGTGAGAAAGCGTACGGAAGAAGCAGAACGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGATGATGTGAATGCTATCCTAGGAGAGGTACAAAAGCTGCAACAAGAGCTTGATCGAGGACGAAACAATTGTTTCAATGTGTCTGTTAGATACTCATTATCCAAACAAATGGAAAATAAGGCTAAACAGATGATGGACCTCAAACAAAATTCTGACTTTCAGCCATTTTCCCAGGTGATCCAACTTCCTGGAATTACCTACTTCTCTTCCAAAGAGTTTGTGGATTTCAACTCAAGGAAATCAACTTGTAATCATCTTTTGGAGGCAATTAAAGATGGCACGAACAAGATGGTGGGATTATATGGTATGGCAGGATCAGGCAAGACGACTTTGGCGAAGGAAGTAGGCAAGAAAGTAGATGAGCTAAAGCTTTTCGACAAGGCCATCATGGCAGTCGTTTCAAAACCCCCAAATGTTTTGAACATTCAGCAGGAAATAGCGGGGCAAATAGGCTTACAACTTCAAGAGTCAACTCAACTTACTAAAGCACAAAGGCTATCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAGGCTTGAAGATATTGGAATTCCATTAAATGAAGGTTGTTGTGTATTGTTGACCACTCGCCTCCATGATGTATGTGTTTCTATGGATTGTGAAAGTATTATTAAATTGCCTCTCTTAACAGAGGAAGAGTCATGGGCATTGTTCAAGGTGTGCGTTAAAACAGCCAATGTGTCAATGAATGAGTTTGATAGCATTGGAAGGCAAATTGTTGATGAGTGTAAAGGTTTGCCTATTGCAATTGTGACAGTCGGAAGCACATTAAAAGGAAAGAGTATTCAAGCGTGGAAGTCAACACTAAGGAGGCTACAACGTCCCCTACCATTGGATATTGAAGATGATTTGAAGACCCCTTATGCATGTGTTGAATTAAGTTATGATAATTTGCCAAGTTCACTAGCCAAGTCGCTCTTCATATTGTGTTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAACAGGACTCTAAAGCTGGGTGATGATATTCATACAATAGGGGAAGCAAGGAATGAGATTTTTGCAACTATTGAGAAATTGTTAGATTCTTGTTTGTTAATGAATACCGATTGGCAGGAACGTGTAAAATTGCATGATGTTGTTCGAGATGTAGCCTTATGGATCGCAAAGAAGCAACATCAAGAAGTTTTGGTGGATAGCCATTCAATTTCAAGCATGCTGGTAAGCAACTGCCACAGATTGAATGATGCGAAGGCACTCTCATTGTGGAATTTGGATGAGAATTTCAAGATCTTTAATAAATTGCATTGTCCATCACTGGAGATTTTGCTACTTCAACCTGATGGGTTCATTGAAGATATTGGAGCAATAGAAACACTTAAAGTGTTGGCACTCATAACAGATGGCTTTCAATGCAGATTTTGGTCATCAACTTTTTGCTCTATCCCACAATCAATTGTACTGTTAACAAATCTTCAAACCTTATGTCTTAGAGGGAAACGATTGGGTGACATCTCTTTTTTGTGTGAACTCAAAGGATTGGAAATTCTTGATTTGCGTGGTTCTCTATTTAATGAATTACCTGCTGAAATTGCAGACATGAAAATGCTGAAACTTTTAGATATATTTGAATGTGAAATTAAGGAAAGCCCTTTAGAAGTAATTGAAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGATAAGAAATCTATCATCCCTGAGAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTCATCTATGATTCCACATGCAGAATGATTGATGAATATATGGGTAACTCTTTCCAAGAATATTTAGATAGTTGTGATGAAGCATTAAGAGCTTTATGCATACAAGGCTTCAGAATCTTTGCTTTGACTTCGTCAATGAAGGATCTCATTTTTGGGGCAAACCACCTTTGGTTAGATAATTGTTCATGGGATCATAAAGATATAAATTTTAGGATAAAGCACCTCGTGGTATCATTCTGTCAAGAGAGAAGATTCATCATTGAGAACTCTGATATGAACACTCTTCAAACACAACAAATCTTCTCAGACTTGATAACTTTACGATTGTTTGAAATGAATAGTCTTGAACAGGTGTTTGAAGCTTCATCTATCAGCTACTCTCTCCCCATGTTACAAGAGCTGTCGATACAAAGTTGTCCTGAATTGAGAACTTGCATCTTCCCCCATGCCATGGTTACGAGCTTGCCAAAGCTGAGGAGACTTGTGATTGAGGGTTGCGGCAAAGTGAAATGGTTATTCTCTTATTCTTTGGCTTCTCATTGTCCGTCCTTGGAGGAGATAATTATAGCCAATTGCTTTGAGCTTGAGAGGCTCATTGATGAAGAAGCTGCACTTGGGGATCCATTACTTCATGACATGCAATACTGTCATCCACATGGAAAGGAAACTGACAGTGCTTATGTGGGCGTTACAGCAAAAAGATTCAATCAGTTGCAAAATCAGCAATCCTTGATCCTTTTTCTCAGGTTGAAAAGTCTACAAATTAAAGGAGTGGAAAAAAGAAAGTTGCAACAGAGTGAGATGGTTGTTATCTTATTCTCTTGCATCTCATTGTCCTTCACTGGAGGCTATACGGATACGCATTGCTCTGAATTTGAGGGGCTGATTAATGAAGAAGCTGCACTTGGAGATCATCCACAGCAACCTTTGATCCGAAATTGTTCTGAACTTGAGAGGCTTGCTGAAGAAGCATCATATGGGGATCGGCTACCACTTCTCAAACTGAAGTACTTACGCTTGTTGTCATTGCCGAAATTGAGAGAGATCTTCCCTCACAAACATGAGAATGACACAGTGAGGGTGGTGAAGTCAGAATTGTGTTCCATGGAGTTAGTAAATCTACCGGAATTAGAATATATTTGGAAAGATCCCATACAAATTTTGAGCTTCTATAGACTTAAAGAGATTAGACTGTGGGGATGCCCAAGATTAAGAAATGTGTTCACTCTTGCTATTGTTACAAGCCTTCCTGAGTTGAGGGAACTTGAAGTAAGAGGATGCAAGGAATGGGAGGGAATATTCTGTGAAGAGTCACTTAAGAATCTGTCTACTACTTCCACTGTTTCCTTCCCCAAACTTGAGACCATTCGTATATATGATTGCCACAAAGTGAGAAGGGTGTTCTCATATTCTCTGGCATCTCATTGTCCTTCATTGGATACAATAACCATATGGAATTGCTGTCAACTGGAGAGGGTTGTTGAAGCTTATGAAGGTGAAAACATTGTCCAAACATATCAAAAATCTCAATAA 3540 0.3884 MAEIVISIVSKVAEYLVAPISHGAAYFFCFKQLNEDFKKAKQELEVKLEDVRKRTEEAERKTEEIMPSVKKWLDDVNAILGEVQKLQQELDRGRNNCFNVSVRYSLSKQMENKAKQMMDLKQNSDFQPFSQVIQLPGITYFSSKEFVDFNSRKSTCNHLLEAIKDGTNKMVGLYGMAGSGKTTLAKEVGKKVDELKLFDKAIMAVVSKPPNVLNIQQEIAGQIGLQLQESTQLTKAQRLSEGLKNKKILIILDDVWSKLRLEDIGIPLNEGCCVLLTTRLHDVCVSMDCESIIKLPLLTEEESWALFKVCVKTANVSMNEFDSIGRQIVDECKGLPIAIVTVGSTLKGKSIQAWKSTLRRLQRPLPLDIEDDLKTPYACVELSYDNLPSSLAKSLFILCSMFPEDHEIHIEDLIRFGNRTLKLGDDIHTIGEARNEIFATIEKLLDSCLLMNTDWQERVKLHDVVRDVALWIAKKQHQEVLVDSHSISSMLVSNCHRLNDAKALSLWNLDENFKIFNKLHCPSLEILLLQPDGFIEDIGAIETLKVLALITDGFQCRFWSSTFCSIPQSIVLLTNLQTLCLRGKRLGDISFLCELKGLEILDLRGSLFNELPAEIADMKMLKLLDIFECEIKESPLEVIERCEQLEELYFWDKKSIIPENFSLSRLKRYVIYDSTCRMIDEYMGNSFQEYLDSCDEALRALCIQGFRIFALTSSMKDLIFGANHLWLDNCSWDHKDINFRIKHLVVSFCQERRFIIENSDMNTLQTQQIFSDLITLRLFEMNSLEQVFEASSISYSLPMLQELSIQSCPELRTCIFPHAMVTSLPKLRRLVIEGCGKVKWLFSYSLASHCPSLEEIIIANCFELERLIDEEAALGDPLLHDMQYCHPHGKETDSAYVGVTAKRFNQLQNQQSLILFLRLKSLQIKGVEKRKLQQSEMVVILFSCISLSFTGGYTDTHCSEFEGLINEEAALGDHPQQPLIRNCSELERLAEEASYGDRLPLLKLKYLRLLSLPKLREIFPHKHENDTVRVVKSELCSMELVNLPELEYIWKDPIQILSFYRLKEIRLWGCPRLRNVFTLAIVTSLPELRELEVRGCKEWEGIFCEESLKNLSTTSTVSFPKLETIRIYDCHKVRRVFSYSLASHCPSLDTITIWNCCQLERVVEAYEGENIVQTYQKSQ 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3319g00003 1179 SUPERFAMILY L domain-like 461 868 - -
Pral3319g00003 1179 PRINTS Disease resistance protein signature 242 256 - -
Pral3319g00003 1179 PRINTS Disease resistance protein signature 616 632 - -
Pral3319g00003 1179 PRINTS Disease resistance protein signature 170 185 - -
Pral3319g00003 1179 PRINTS Disease resistance protein signature 332 346 - -
Pral3319g00003 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Pral3319g00003 1179 SMART AAA_5 167 297 IPR003593 GO:0016887
Pral3319g00003 1179 Gene3D - 297 380 IPR042197 -
Pral3319g00003 1179 Gene3D - 381 470 IPR036388 -
Pral3319g00003 1179 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Pral3319g00003 1179 Coils Coil 30 61 - -
Pral3319g00003 1179 Gene3D - 141 293 IPR027417 -
Pral3319g00003 1179 Gene3D Ribonuclease Inhibitor 507 689 IPR032675 -
Pral3319g00003 1179 SUPERFAMILY L domain-like 980 1161 - -
Pral3319g00003 1179 FunFam Probable disease resistance protein At1g61300 141 291 - -
Pral3319g00003 1179 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 910 1162 - -
Pral3319g00003 1179 Coils Coil 69 96 - -
Pral3319g00003 1179 Gene3D Ribonuclease Inhibitor 957 1171 IPR032675 -
Pral3319g00003 1179 Gene3D Ribonuclease Inhibitor 696 875 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3319g00003 Pral-Chr3319 253915 264465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3319g00003 171 349 WRKY Transcription Factor Family AT5G45050 27.419 1.03e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3319g00003 - - pcin:129306241 1184.09