Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3319g00002 ATGGCAGAGATTGTGATCTCAATCGTGTCAAAGGTTGCAGAATACTTGGTGGGTCCGATTTCACATGGAGCTGCATATTTGTTCTGCTTTAAGCAAGTTAATGAAGACTTCGAGAAAGCAAAACAAGAGCTGGAGACGAAACTAGAAGACGTGAAAAAGCGCAAGGAAGAAGCTGATCGAAAAACTGAAGAAATAATGACATCCGTGAAGACGTGGTTGGATGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGCTGCAACAAGAGTTTGAAGGAGGACGAAACAAGTGTTTTAATGTATCACTAAGATATTCTTTAGCAAAGCAAATGGAAAATAAGGCTAAGCGCATGATAGATCTCAAACAAAATTCCAACTTTGAGCCATTTTCCCAACTGACCCAACTTCCTGGCATTAAATACTTCTCTTCCAAAGGGTTTATGGATTTTGACTCAAGGAAATCAATTTATGATCGTCTTTTGGAGGCAATTATAAATGGCAAAAACAAGATGGTGGGACTATATGGTATAGGGGGCTCAGGCAAAACAACTTTGGCAAAGCAAGTGAGCAAGAAAGTGGATGAGTTGAAGCTTTTTGACAAGGTCATCACGGTAGTCGTTTCTAAGCCCCCAAATATTCTGAACATTCAACAAGAAACAGCAGAGCAAATAGGCTTGCCATTTCAAGAGGCAACTCAACTTAATAGAGCACAAAGGCTGTCAGAGGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCGAACTATGTCTTGAAGAAATTGGAATTCCATTAAATGAAGGTTGTTGTGTATTGTTGACCACTCGTCTTCGTGATGTATGTGTTTCTATGGATTGTGAAAGTATTATGGAATTGTCTCTCTTAACGAAGGAAGAGTCATGGGCATTGTTCAAGATGCGTGTTAAAACAACCAACGTCTCAATGAATGAGTTTGATAGCATTGGAAGGCAAATTGTTGATGAGTGTAAAGGTTTGCCTATTGCGATTGTGATAGTTGGAAGCACATTAAAAGGAAAGAGTATTCAAGCGTGGAAGTCAACACTAAGGAGGCTACAACATCCCCTATCATTGGATATTGAAGATGATTTGAAGACCCTTTATGCAATTCTTGAAGTAAGTTATGATAATTTGCCGAGTTCACTAGCCAAGTCGCTCTTCATATTGTGTTCTATGTTCCCTGAGGATCATGAAATCCATAAAGAGGATTTAATTCGTTTTGGCAAAGGGACTTTAAAGCTTGGTGACGATATTTATACAATAGGGGATGCAAGGAATAGGGTTGTAGCGAATATTGAGACATTGTTAGATTCTTGTTTGTTAATGGATACCAATAAGCAGGAATGTGTAAAATTGCATGATGTGGTTCGAGATGTAGCCTTACGGATTGCGAAGAAGCAACATCAAGAAGTTTTGGTGGATAGCCATTCAATTTCGAACATGCTGGTAAGCAACTGTCAAAGAGGAAATGATACGAAGGCACTCTCACTGTGGAATTTGGATGAGAATTTCAAGGTCTCTAATGAATTGCGTTGTCCATCACTTGAGATTTTGCTACTTCAACCTAATGGTTTCATTGAAGATATTGGAGGAATAAGAACACTTAAAGTGTTGGCACTCATAGAAGATGGCTTTCGATGGGGATTTTGGTCATCAACTTTTTGCTCAATCCCACAATCAATTGTATTGTTAACAAATCTTCAAACATTATGTCTTAGAGGGAAACAATTGGGTGACATCTCTTTTTTGGGTGAACTCAAAGGATTGGAGATTCTTGATTTGCGTGGTTCTTTATTTAATGAATTACCTGCTGAAATTGCAGACATGAAAATGCTGAAACTCTTGGATATATTTGGTTGTGAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTCTGGGAGAAGAAATCTGTCATCCCTGAGAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTCATCTATGATTCCACATGCAGAATGATTGATGAATATATGGGCAACTCTTTCCAAGAATATTTGGATAGTTGTGATGAAGCATTAAGAGCTTTATGCATACAAGGCTTCAGAATCTTTGCCCTGACTTCGTCAATGAAGGATCTCATTTTTCGTGCAAACCACCTTTGGTTAGATAATTGTTCGTGGGATCATAAAGATATAAATTTTAGGATAAAGCACCTCGTGGTATCATTCTGTCAAGAGAGAAGATTCATCATTGAGAACTCTGATATGAACACTCTTCAAACACAACAAATGTTCTTAGACTTGATCACTTTACGATTGTTTGAAATGAATAGTCTTGAACAGGTGTTTCGAGCTTCATCTATCAGCTACTCTCTCCCCATGTTACAAGAGCTGTCGATACAAAGTTGTCCTGAGTTGAGAACGTGCATCTTCCCCCATGCCATGGTTACGAGCTTGCCAAAGTTGAGGAAACTTGAGATTGAGGGTTGCGACAAAGTGAAATGGTTATTCTGTTATTCTTTGGCTTCTCATTGTCCTTCCTTGGAGAAGATAATTATAACCGATTGCTTTAAGCTTGAGAGGCTCATTGATGAAGAAGCTGCACATGGGGATCCATCACTTCATGACATGCAATACTGTCATCCACATGGAAAGGAAACTGACAGTGCTTATGTGGGCGTTACAGCAAAAAGATTCAATCAGTTGCAAAATGAGCAATCCTTGATACTTTTTCTAAGGTTGAAAAGTCTACAAATTAAAAGGAGTGGAAAAAAGAAAGGTATATTGGAAATCCAAGTCAGAGGAAGAGTAGAAGATGATGAAGAATCTATTAAAGCCCAAGAACCTCTAAAGCTGGATTCAGAGATGAGTGAATTAAAATTAGATGATCTACCAGAATTGGAATATATTTGGAAGGGCCCCACCCAAATTGTGAGCCTCCATAGACTTGAAAATGTTTTGTTGTGGAACTGCCCAAAACTAAAAAGTATCTTCACTCTAGCTATTGTTGCAAGCCTTCCAGAGTTGAGAACACTTGAAGTATATTGCTGTGAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAACCTCTCTTCTTCTAATATTTGCTTCCCCAAACTTAAGCAGATTGACATATATGATTGCAGCAGAGTGAGATGGTTGTTATCTTATTCTCTTGCATCTCATTGTCCTTCACTAGAGATTATATCCATAGACCATTGCTCTGAATTTGAGAGGCTCATTGATGAAGAAGCTGCACATGGGGATCCACTACTTCATGATATGCAAGATCATCCACAGCAACCTTTGATCCGAAATTGTTCTGAACTTGAGAGGCTTGCTGAAGAAGCATCATATGGGGATCGGCTACCACTTCTCAAACTGAAGCGCTTACGCTTGTTGTCATTGCCGAAATTGAGAGAGATCTTCCCTCACAAACACGACAATGACACAGTGAGGGTGGTAAAGTCAGAATTGTGTGCTGTACAGTTAGGAGATCTACCGGAATTAGAATATATTTGGAAAGATCCCACACAAATTTTGAGCTTCCATAGACTTGAATATATTGCACTGAGGAAATGCCCAAGATTAAGAAATATGTTCACTGTTGCTGTTGTTACAAGCCTTCGAAAGTTGAGGGAACTTGATGTAAGAAGATGCAATGAATGGGAGGGAATATTTTGTGAAGAGTCACTTAAGAATCTGTCTACTACTTCCACTAGAATAACTATAGAGAATTGCTATGAACTGGAGGGGGTTGTTGAAGCTTATGAAGGTGAAGTAGCTGCTCATCATCAAAGGCTGTTTCCTAAACTGAATTATTTGAAGCTCAGTGATTTGCCAAAGTTGAGAGAGATTTATGAAGGTTATGAATTCAACCTCCTTTCTGGTACTATAACAATCAAAGATTGTCCAAACATATCAAAAATCTCAAAAATCCCATTAGAAGACAAACCCTCATCATCAGTTAATTTGACCAGATTGCTTATGTGGGGTGCCATATGGTATGACAACTCATCCTCCCTCTCTTCCTCTCTTCCACATCATGGGATAAGCTTGCGTTTTGATAAGGGGAGGTTTGGAATTGCCGTTGTGATACTTGAGGCGGTGGGAGTTGTTTCGAGTAGCAAAGGAGGAGAGTACTCAGGGTCTCAAATAGATCTGACGAGCATGTTGTGGGGAAAGGAAACTGACAGTGCTTATGTGGGTGTTATTGCAAAAAACTTCAATCAGTTGCAAAATCAGCAATCCTTGATCCTTTTTCTCAGGTTGAAAAGTCTACAAATTGAAAGCAGTGGAAGAAAGAAAGGTATATTGGAAATCCAAGTCAGAGAAAGAGTAGAAGATGATGAAGAATCTATTAAGGCACAAGAACCTCTAAAATTGGATTTAGAGTTGAGTGAATTAAAATTAGGTGGTCTACCAGAATTGGAATATATTTGGAAGGGTCCCACCCAAATTGTGAGCCTTCATAGACTTGAAAATGTTTCATTGGGGAGATGCCCAAAATTAAAAAATATCTTCACTCTTGCTATTGTTGCAAGCCTTCCAGAGTTGAGAAGACTTGAAGTAGATGATTGCGAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAACCTCTCTTCTTCTAATATTTGCTTCCCCAAACTTAAGGAGATTGAGATATCTTATTGCAACAAAATGACATGGTTGTTATCTTATTCTCTAGCATCTCATTGTCCTTCACTAGAGTACATATACATAGACAGTTGCTATGAATTTGAGGGGCTTATTGGTGATATGCAAGATCATCCACAGCAACCTTTGATCCGAAATTGTTCTCAACTTGAGAGGCTTGCTGAAGAAGCATCATATGGGGATCGGCTACCACTTCTCAAACTGAAGCGCTTACGCTTGTTGTCATTGCCGAAATTGAGAGAGATCTTCCCTCACAAGCAGGGGAATGACACAGTGAGGGTGGCAAAGTTAGAATTGTGTTCGATAGTGTTAGTTAATCTACCGGAATTAGAATATATTTGGAAAGGCCCCACACAAATTTTGAGCCTCCATAGGCTTGAATATATTATACTGAGGGAATGCCCAAGATTAAGAAATATGTTCACTGTTGCTGTTGTTACAAGCCTTCCAGAGTTGAGGGAACTTGAAGTAGATGAATGCAACGAATGGGAGAGAATACTTTGTGAAGAGTCACTTAAGAATCTGTCTACTTCTTCCACTGTTTGCTTCCCCAAACTTGAGACCATTTTTATATCTCGTTGTCACAAAGTGAGAAGGGTGTTCCCATATTCTCTGCCATCTCATTGTGCTTCATTGAAGAAATTATATATATGGGATTGCTGTCAACTGGAGGGAGTTGTTGAAGCTTACGAAGGTGAAGTAGCTGCTCATCATCATCAAAGGCTGTTTCCTGAACTGAATTATTTGTATCTCCAGAATTTGCCAAAGTTGAGAGAGATTTATGAAGGTTATGAATTCAACCTCCTTTCTGGTACTATAACAATAGAAGATTGTCCAAACATATCAAAAATCTCAAAAATCCCATTAGAAGACAAGCCCTCATCATCAGGTTCGTAG 5601 0.3881 MAEIVISIVSKVAEYLVGPISHGAAYLFCFKQVNEDFEKAKQELETKLEDVKKRKEEADRKTEEIMTSVKTWLDDVNAILEEVQKLQQEFEGGRNKCFNVSLRYSLAKQMENKAKRMIDLKQNSNFEPFSQLTQLPGIKYFSSKGFMDFDSRKSIYDRLLEAIINGKNKMVGLYGIGGSGKTTLAKQVSKKVDELKLFDKVITVVVSKPPNILNIQQETAEQIGLPFQEATQLNRAQRLSEGLKNKKILIILDDVWSELCLEEIGIPLNEGCCVLLTTRLRDVCVSMDCESIMELSLLTKEESWALFKMRVKTTNVSMNEFDSIGRQIVDECKGLPIAIVIVGSTLKGKSIQAWKSTLRRLQHPLSLDIEDDLKTLYAILEVSYDNLPSSLAKSLFILCSMFPEDHEIHKEDLIRFGKGTLKLGDDIYTIGDARNRVVANIETLLDSCLLMDTNKQECVKLHDVVRDVALRIAKKQHQEVLVDSHSISNMLVSNCQRGNDTKALSLWNLDENFKVSNELRCPSLEILLLQPNGFIEDIGGIRTLKVLALIEDGFRWGFWSSTFCSIPQSIVLLTNLQTLCLRGKQLGDISFLGELKGLEILDLRGSLFNELPAEIADMKMLKLLDIFGCEIEKSPLEVIGRCEQLEELYFWEKKSVIPENFSLSRLKRYVIYDSTCRMIDEYMGNSFQEYLDSCDEALRALCIQGFRIFALTSSMKDLIFRANHLWLDNCSWDHKDINFRIKHLVVSFCQERRFIIENSDMNTLQTQQMFLDLITLRLFEMNSLEQVFRASSISYSLPMLQELSIQSCPELRTCIFPHAMVTSLPKLRKLEIEGCDKVKWLFCYSLASHCPSLEKIIITDCFKLERLIDEEAAHGDPSLHDMQYCHPHGKETDSAYVGVTAKRFNQLQNEQSLILFLRLKSLQIKRSGKKKGILEIQVRGRVEDDEESIKAQEPLKLDSEMSELKLDDLPELEYIWKGPTQIVSLHRLENVLLWNCPKLKSIFTLAIVASLPELRTLEVYCCEEWEGIFCEESLKNLSSSNICFPKLKQIDIYDCSRVRWLLSYSLASHCPSLEIISIDHCSEFERLIDEEAAHGDPLLHDMQDHPQQPLIRNCSELERLAEEASYGDRLPLLKLKRLRLLSLPKLREIFPHKHDNDTVRVVKSELCAVQLGDLPELEYIWKDPTQILSFHRLEYIALRKCPRLRNMFTVAVVTSLRKLRELDVRRCNEWEGIFCEESLKNLSTTSTRITIENCYELEGVVEAYEGEVAAHHQRLFPKLNYLKLSDLPKLREIYEGYEFNLLSGTITIKDCPNISKISKIPLEDKPSSSVNLTRLLMWGAIWYDNSSSLSSSLPHHGISLRFDKGRFGIAVVILEAVGVVSSSKGGEYSGSQIDLTSMLWGKETDSAYVGVIAKNFNQLQNQQSLILFLRLKSLQIESSGRKKGILEIQVRERVEDDEESIKAQEPLKLDLELSELKLGGLPELEYIWKGPTQIVSLHRLENVSLGRCPKLKNIFTLAIVASLPELRRLEVDDCEEWEGIFCEESLKNLSSSNICFPKLKEIEISYCNKMTWLLSYSLASHCPSLEYIYIDSCYEFEGLIGDMQDHPQQPLIRNCSQLERLAEEASYGDRLPLLKLKRLRLLSLPKLREIFPHKQGNDTVRVAKLELCSIVLVNLPELEYIWKGPTQILSLHRLEYIILRECPRLRNMFTVAVVTSLPELRELEVDECNEWERILCEESLKNLSTSSTVCFPKLETIFISRCHKVRRVFPYSLPSHCASLKKLYIWDCCQLEGVVEAYEGEVAAHHHQRLFPELNYLYLQNLPKLREIYEGYEFNLLSGTITIEDCPNISKISKIPLEDKPSSSGS 1866
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral3319g00002 1866 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1119 1330 - -
Pral3319g00002 1866 FunFam Probable disease resistance protein At1g61300 149 291 - -
Pral3319g00002 1866 Gene3D - 144 293 IPR027417 -
Pral3319g00002 1866 SUPERFAMILY RNI-like 975 1254 - -
Pral3319g00002 1866 SMART AAA_5 167 297 IPR003593 GO:0016887
Pral3319g00002 1866 Gene3D Ribonuclease Inhibitor 1182 1364 IPR032675 -
Pral3319g00002 1866 Gene3D - 384 471 IPR036388 -
Pral3319g00002 1866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 399 IPR027417 -
Pral3319g00002 1866 SUPERFAMILY L domain-like 1473 1832 - -
Pral3319g00002 1866 Gene3D Ribonuclease Inhibitor 901 1093 IPR032675 -
Pral3319g00002 1866 Gene3D Ribonuclease Inhibitor 499 883 IPR032675 -
Pral3319g00002 1866 Coils Coil 30 64 - -
Pral3319g00002 1866 Gene3D Ribonuclease Inhibitor 1467 1650 IPR032675 -
Pral3319g00002 1866 Gene3D Ribonuclease Inhibitor 1672 1860 IPR032675 -
Pral3319g00002 1866 SUPERFAMILY L domain-like 461 865 - -
Pral3319g00002 1866 PRINTS Disease resistance protein signature 242 256 - -
Pral3319g00002 1866 PRINTS Disease resistance protein signature 170 185 - -
Pral3319g00002 1866 PRINTS Disease resistance protein signature 332 346 - -
Pral3319g00002 1866 PRINTS Disease resistance protein signature 822 838 - -
Pral3319g00002 1866 Coils Coil 69 96 - -
Pral3319g00002 1866 Gene3D - 297 383 IPR042197 -
Pral3319g00002 1866 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral3319g00002 Pral-Chr3319 179144 203415 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3319g00002 152 349 WRKY Transcription Factor Family AT5G45050 26.190 1.74e-09 61.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3319g00002 - - pcin:129306241 1498.41