Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3318g00068 ATGGCAGAGATTGTGATCTCAATCGTGTCAAAGGTTGCAGAATACTTAGTGGCTCCGATTTCACATGGAGCTGCGTATTTTTTCTGCTTTAAGCAGCTTAATGAAGACTTCAAGAAAGCAAAACAAGAGCTAGAGGTGAAACTAGAAGATGTGAGAAAGCGTACGGAAGAAGCAGAACGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGATGATGTGAATGCTATCCTAGGAGAGGTACAAAAGCTGCAACAAGAGCTTGATCGAGGACGAAACAATTCCATTTTCCCAGGTGATCCAACTTCCTGGAATTACCTACTTCTCTTCCAAAGAGTTTTGGATTTCAACTCAAGGAAATCAACTTGTAATCATCTTTTGGAGGCAATTAAAGATGGCACGAACAAGATGGTGGGATTATATGGTATGGCAGGATCAGGCAAGACGACTTTGGCGAAGGAAGTAGGCAAGAAAGTAGATGAGCTAAAGCATTTTGACAAGGTCATCATGGCAGTCGTTTCAAAACCCCCAAATGTTTTGAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTATCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAGGCTTGAAGATGTTGGAATTCCATTAAATGAAGGTTGTTGTGTATTGTTGACCACTCGCCTCCATGATGTATGTGTTTCTATGGATTGTGAAAGTATTATTAAATTGCCTCTCTTAACAGAGGAAGAGTCATGGGCATTGTTCAAGATGTGCGTTAAAACAGCCAATGTGTCAATGAATGAGTTTGATAGCATTGGAAGGCAAATTGTTGATGAGTGTAAAGGTTTGCCTATTGCAATAGTGACAGTCGGAAGCACATTAAAAGGAAAGAGTATTCAAGCGTGGAAGTCAACACTAAGGAGGCTACAACGTCCCCTACCATTGGATATTGAAGATGATTTGAAGACCCCTTATGCATGTGTTGAATTAAGTTATGATAATTTGCCGAGTGCACTAGCCAAGTCGCTCTTCATATTGTGTTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAACGGGACTCTAAAGCTTGGTGACGATATTCATACAATAGGGGAAGCAAGGAATGAGATTTTTGCAGCTATTGAGAAATTGTTAGATTCTTGTTTGTTAATGAATACCAATAAGCAGGAACGTGTAAAATTGCATGATGTTGTTCGAGATGTAGCCTTATGGATCACGAAGAAGCAACATCAAGAAGTTTTGGTAGATAGCCATTCAATTTCGAGCATGCTGGTAAGCAACGGCCACAAATTGAATGATGCGAAGGCACTCTCATTGTGGAATTTGGATAAGAATTTCAAGATCTTTAATAAATTGCATTGTCCATCACTGGAGATTTTGCTACTTCAGCCTGATGGGTTCATTGAAGATATTGGAGCAATAGAAACACTTAAAGTGTTGGCACTCATAACACATGGCTTTCAATGGAGATTTCAGCAGCAAACTTTTTGCTCTGTCCCACAATCAATTGTATTGTTAACGAATCTTCAAACCTTGTGTCTTAGAGGGAAACAATTGGGTGACATCTCTTTCTTGTGTGAACTCAAAGGATTGGAGATTCTTGATTTGCATGGTTCTCTATTTAATGAATTACCTGCTGAAATTGCAGACATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTGAAATTGAGAAAAGCCCTTTAGAAGTAATTAGAAGATGTGAGCAGCTTGAAGAATTATACTTCCGGGAGAAGACATCTGTCATCCCTGAGAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTCATCTATGATTCCACGTGCAGAATGATTGATGAATATATGGGTAACTCTTTCCAAGAATATTTAGATAGTTGTGATGAAGCATTAAGAGCTTTATGCATACAAGGCTTCAGAATCTTTGCTTTGACTTCGTCAATGAAGGATCTCATTTTTCGGGCAAACCACCTTTGGTTAGATAATTGTTCATGGAATCATAAAGATATAAATTTTAGGATAAAGCAACTCGTGGTATCATTCTGTCAGGAGAAAAGATTCATCATGGAGAACTCTGATATGGACACTCTTCAACCACAACAAATCTTCTCAGACTTGATAACTTTACGATTGTTTAAAATGAATAGTCTTGAACAGTTGTTTGAAGCTTCATCTATCAGCTACTCTCTCCCCATGTTACAAGAGCTGTCGATACAAAGTTGTCCTGAATTGAGAACTTGCATCTTCCCCCATGCCATGGTTACGAGCTTGCCAAAGCTGAGGAGACTTGTGATTGAGGGTTGCGGCAAAGTGAAATGGTTATTCTCTTATTCTTTGGCTTCTCATTGTCCGTCCTTGGAGGAGATAATTATAGCCAATTGCTTTGAGCTTGAGAGGCTCATTGATGAAGAAGCTGCACTTGGGGATCCATTACTTCATGACATGCAATACTCTCATCCACATGGAAAGGAAACTGACAGTGCTTATGTGGGCGTTACAGCAAAAAGATTCAATCAGTTGCAAAATCAGCAATCCTTGATCCTTTTTCTCAGGTTGAAAAGTCTAAAAATTGAAAGAAGTGGAAAAAAGAAAGGTATATTGGAAATCCAAGTCGGAGGAAGAGTAGAAGATGATGAAGAATCTATTAAAGCCCAAGAACCTCTAAAGTTGGATTCAGAGTTGAGTGAATTAAAATTAGATGGTCTACCAGAATTGGAATATATTTGGAAGGGCCCCACCCAAATTGTGAGCCTCCATAGACTTGAAGATGTTTCCTTGCGGGACTGCCCAAAATTAAAAAGTATCTTCACTCTAGCTATTGTTGCAAGCCTTCCAGAGTTGAGAACACTTGAAGTATATTATTGCAAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAACCTCTCTTCTTCTAATATTTGCTTCCCCAAACTTAAGCAGATTGACATATGGGGTTGCCACAAGGTGAGATGGTTGTTATCTTATTCTCTGGCATCTCATTGTCCTTCAATAGGGTATGTACGCATACACAGTTGCTCTGAATTTGAGGGGCTTATTGGTGAAGAAGCTGCACATGGGGATCCACTACTTCATGATATGCAAGATCATCCACAGCAACCTTTGATCCGAAATTGTTCTGAACTTGAGACGCTTGCTGAAGAAGCATATCTCAAACTGAAGTACTTACGGTTGGTGGCACTGCCGAAATTGAGAGAGATCTTCCCTCACCAACATGAGAATGACACAGCGAGAGTGGTAAAGTCAGAATTGTGGTCGATATTCTTAGCTGATCTACCGGAATTAGAACATATTTGGAAAGGCCCCACACAAATTTTGAGCTTCCATAGACTTGAAGATATTACACTGTGGGAATGCCCAAGATTAAGAAATATATTCACTCTTGCTATTGTTACAAGCCTTCCAGAGCTGAGGAAACTTGATGTAAGACGATGCGATGAATGGGAGGGAATATTTTGTGAAGAGTCACTTAAGAATCTGTCTACTACTTCCACTGTTTGCTTCCCCAAACTTGAAATCATTGAAATAATTGATTGCCACAAAGTGAGAAGGGTGTTCTCATATTCTCTGGCATCTCATTGTCCTTCATTGAAGAAATTACATATATGGGATTGCTGTCAACTGGAGGGAGTTGTTGAAGCTTACGAAGGTGAAGTAGCTGCTCATAATCATCAAAGGCTGTTTCCTGAACTGAATTATTTGAAGCTCAGTAATTTGCCAAAGTTGAGAGAGATTTATGAAGGTTATGAATTCAACCTCCTTTTTGGTACTATAACAATAGAAGATTGTCCAAACATATCAAAAATCTCAAAAATCCCATTAGAAGACAAGCCCTCGTCATCAGGCTGCTAA 3984 0.3911 MAEIVISIVSKVAEYLVAPISHGAAYFFCFKQLNEDFKKAKQELEVKLEDVRKRTEEAERKTEEIMPSVKKWLDDVNAILGEVQKLQQELDRGRNNSIFPGDPTSWNYLLLFQRVLDFNSRKSTCNHLLEAIKDGTNKMVGLYGMAGSGKTTLAKEVGKKVDELKHFDKVIMAVVSKPPNVLNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLRLEDVGIPLNEGCCVLLTTRLHDVCVSMDCESIIKLPLLTEEESWALFKMCVKTANVSMNEFDSIGRQIVDECKGLPIAIVTVGSTLKGKSIQAWKSTLRRLQRPLPLDIEDDLKTPYACVELSYDNLPSALAKSLFILCSMFPEDHEIHIEDLIRFGNGTLKLGDDIHTIGEARNEIFAAIEKLLDSCLLMNTNKQERVKLHDVVRDVALWITKKQHQEVLVDSHSISSMLVSNGHKLNDAKALSLWNLDKNFKIFNKLHCPSLEILLLQPDGFIEDIGAIETLKVLALITHGFQWRFQQQTFCSVPQSIVLLTNLQTLCLRGKQLGDISFLCELKGLEILDLHGSLFNELPAEIADMKMLKLLDIFGCEIEKSPLEVIRRCEQLEELYFREKTSVIPENFSLSRLKRYVIYDSTCRMIDEYMGNSFQEYLDSCDEALRALCIQGFRIFALTSSMKDLIFRANHLWLDNCSWNHKDINFRIKQLVVSFCQEKRFIMENSDMDTLQPQQIFSDLITLRLFKMNSLEQLFEASSISYSLPMLQELSIQSCPELRTCIFPHAMVTSLPKLRRLVIEGCGKVKWLFSYSLASHCPSLEEIIIANCFELERLIDEEAALGDPLLHDMQYSHPHGKETDSAYVGVTAKRFNQLQNQQSLILFLRLKSLKIERSGKKKGILEIQVGGRVEDDEESIKAQEPLKLDSELSELKLDGLPELEYIWKGPTQIVSLHRLEDVSLRDCPKLKSIFTLAIVASLPELRTLEVYYCKEWEGIFCEESLKNLSSSNICFPKLKQIDIWGCHKVRWLLSYSLASHCPSIGYVRIHSCSEFEGLIGEEAAHGDPLLHDMQDHPQQPLIRNCSELETLAEEAYLKLKYLRLVALPKLREIFPHQHENDTARVVKSELWSIFLADLPELEHIWKGPTQILSFHRLEDITLWECPRLRNIFTLAIVTSLPELRKLDVRRCDEWEGIFCEESLKNLSTTSTVCFPKLEIIEIIDCHKVRRVFSYSLASHCPSLKKLHIWDCCQLEGVVEAYEGEVAAHNHQRLFPELNYLKLSNLPKLREIYEGYEFNLLFGTITIEDCPNISKISKIPLEDKPSSSGC 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3318g00068 1327 Gene3D - 350 439 IPR036388 -
Pral3318g00068 1327 SMART AAA_5 136 266 IPR003593 GO:0016887
Pral3318g00068 1327 Gene3D Ribonuclease Inhibitor 475 650 IPR032675 -
Pral3318g00068 1327 SUPERFAMILY RNI-like 739 1261 - -
Pral3318g00068 1327 Gene3D Ribonuclease Inhibitor 665 843 IPR032675 -
Pral3318g00068 1327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 368 IPR027417 -
Pral3318g00068 1327 Coils Coil 30 61 - -
Pral3318g00068 1327 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 875 1067 - -
Pral3318g00068 1327 PRINTS Disease resistance protein signature 585 601 - -
Pral3318g00068 1327 PRINTS Disease resistance protein signature 139 154 - -
Pral3318g00068 1327 PRINTS Disease resistance protein signature 211 225 - -
Pral3318g00068 1327 PRINTS Disease resistance protein signature 301 315 - -
Pral3318g00068 1327 Gene3D - 110 262 IPR027417 -
Pral3318g00068 1327 Gene3D Ribonuclease Inhibitor 917 1290 IPR032675 -
Pral3318g00068 1327 FunFam Probable disease resistance protein At1g61300 117 260 - -
Pral3318g00068 1327 Gene3D - 266 349 IPR042197 -
Pral3318g00068 1327 Pfam NB-ARC domain 126 355 IPR002182 GO:0043531
Pral3318g00068 1327 SUPERFAMILY L domain-like 430 834 - -
Pral3318g00068 1327 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3318g00068 Pral-Chr3318 1289734 1300859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3318g00068 138 449 WRKY Transcription Factor Family AT5G45050 23.529 7.72e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3318g00068 - - pcin:129306241 1445.25