Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3318g00067 ATGAGGAAGATGGAGCGCCTTCAGCTTAGGAATCGGATTGAAAAGAAAGCTGCCTATGTGCAGGAGCTGGAGAAGCAATACATAGGTCTTCAGAATCTCATACAACGAAATGAGCAATTATATGGCTCAGGAAATGCTGCCAGTGGAGGTGTGTCCTTACCTTTTATTCTTGTACAGACTCATCCACATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAATAGCACTCCGTTTGAGCTGCATGATGACAACTATGTCCTCAAGGCAATGAAATTTTGTGAGAGACCGCAGAGTGATAATATGACGCAGAATCTTGTGGACGGGGGTGAAGGTTCTAGCATGTCAGGCTTGTATCAGGCGCAGGTCACTCCTTCAGTGTCAAACGAACCGGTCAGAACTCCAACCTCGCCGCCTCTCCCTGGGATATTGAAGGCAAGAGTTAAGCATGAGCATTGA 480 0.4542 MRKMERLQLRNRIEKKAAYVQELEKQYIGLQNLIQRNEQLYGSGNAASGGVSLPFILVQTHPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQSDNMTQNLVDGGEGSSMSGLYQAQVTPSVSNEPVRTPTSPPLPGILKARVKHEH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3318g00067 159 SUPERFAMILY E2F-DP heterodimerization region 3 111 IPR037241 -
Pral3318g00067 159 CDD DP_DD 3 98 IPR014889 -
Pral3318g00067 159 PANTHER TRANSCRIPTION FACTOR DP 3 131 IPR015648 GO:0005667|GO:0051726
Pral3318g00067 159 Pfam Transcription factor DP 3 113 IPR014889 -
Pral3318g00067 159 Coils Coil 6 40 - -
Pral3318g00067 159 FunFam Transcription factor-like protein DPB 1 120 - -
Pral3318g00067 159 Gene3D Transcription factor DP 1 131 IPR038168 -
Pral3318g00067 159 MobiDBLite consensus disorder prediction 129 149 - -
Pral3318g00067 159 SMART DP_2 1 157 IPR014889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3318g00067 Pral-Chr3318 1274519 1286428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3318g00067 3 108 E2F-DP Transcription Factor Family AT5G02470 49.057 4.49e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3318g00067 K04683 - zju:107414839 275.789