Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3318g00057 ATGGAAGTACCATGGAAATACCATGTCTTCTTGAGCTTTAGGGGAGAAGACACCCGCAACAGCTTCACAGGTCACTTACATGCTGCTCTTGAACGAAGAGGTATCATAACTTTCATAGATGATAAACTTAGGAAAGGAGAAGATATCTCCCAAGAACTCCTCCAGGCAATTGAAGGATCTCTGGTCTCCATTGTTATTCTTTCCCCAGACTATGCCTCTTCTTGTTGGTGTTTGGCTGAACTCCAAAAGATTCTTGAATCCAAGCGATCTTTGGGAAGAGAAGTTGTTCCGCTGTTCTTTAACATAGATCCATCTCATGTGAGGCATCAGAGAGGTACCATTGGAGATGCTTTTGAAAGCCACAGGGAGAGATTTGCTGATGACAAGGTGCAAGGATGGAGAGATGCTTTGCATGAAGTTGCAAATATATCTGGCTATGACTGCAACCATCGGCATGAAGCGAAATTGATCGAGGAAATTGTTGCAGATGTATGGGCAAAACTACAACCTAAATTACCATATTGTTTCAACAATGAGCTCGTTGGCATTGAATCAAGAGTAGAAGAAGTTAATTCACTTTTAGGGATTGGATTAGCTGGTGTCCGCTTAATAGGAATATGGGGCATGCCTGGTATTGGAAAGACAACTCTTGCAAGAACTATCTATGAGAGGATATTTCGCGAATTTGACATTTGTTGTTTTCTTGCTAATATGAAAGAAAGCTCTGAAACAAATGGCTTCGTTGCTTTGCAAAGAAAACTTCTCTCCAAACTCAAGATAAAAGGCATGGAAGTTGATGATACATATGAAGGAAAGAATATAATAAGAAACATGCTATGCAACAAAAAAGTTCTAGTTGTCTTGGATGATGTAAGTGAAATAAACCAACTAGAAAACCTCTGTATAAAGCAAGCTTGTCTGGCTCCTGGGAGTAGAGTAATTGTTACAACTAAAAATAAGCATGTATTGATAGAGCATGGAGAATTTGAAATTTATGTGGCTGAATTGTTAAACAATGATGAATCTGTCCAGCTCTTCTGCAAGAAGGCTTTTAAAAGGGATGAACCTATAGAAGGTTATTGGAAGCTGTGTAAAGACATCATCCACTATGCTGGAGGTCTTCCTTTAACTCTTGAAGTGTTGGGTTCTTATTTTTGTAGAAGAAGTGAGCTTGAATGGAAAGAAGGTTTGGAGAAAATTAAAATGTTTCCACCAACCGATATTCTAAGGAGACTTAGAATCAGTTATGATGCATTGAGTGAAACGGAAAAGAAAATTTTTTTAGATGTTGCTTGTTGTTTCAAGGGAATGATCAAAGACCAAGTGACACAAATATTTGAAATATGTGGCGATCTTTATCCAATACTTGGAATACGAGAACTTGTTGAGAAATGCTTGCTAACAGAATATTGTTGCGGTCATGGTGCATGGCGTTTGGGTATGCATGATATCCTTCAAAAAATGGGCAAAAGTATTGTTGTAGAGGAATCACCTAATGATGCTGGCCGACGTAGCAGGCTATGGTCACTGGAAGATGTTGATCATGTGATGTCAAAAAACAAAGGCACTGATTTGGTTGAAATTATTCATCTTCAATCACATATGCCATATGAAGCAAATTGGGACCCTGAGGTATTCTCTATGACGCGTAGCCTCACAATACTCATCATATTATGTGATGTGTACCTTCCTGGAGGTCTCAAATTTCTTCCCAGTTCATTAAAAATTCTTGAGTGGAAAGCATATCCTCTGAAATCCTTGCCTGATGGTGCTCATCTTGATGAACTTGTTCTCCTTAGAATGCATCATAGCAAGATCATACAACTATGGGGGAGAACACAAATGTCAAAAAAGTTAAAGTTTATTGATTTAAGTTATTCTGAAGAATTCATAAGAACTCCTGATTTCTCCATGCTGCCCAATCTTGAGCAACTAATTCTTAAAGGTTGCGTAAGACTTTCTGAAGTTCACCCATCACTTGGACAACATACCAAAGTTGTTGTACTGGATTTGAATGATTGCAAGAATCTTAAAGCTCTTCCAATCAGAATGGAAATGGATTCATTAAAGAAATTGATCCTTTCTGGCTGCTTAAAAGTCAAAAAGCTTCCAGAATTTGGGGAAAACATGACCAAGTTGTTGGTTCTTGATGTGAAAAATTGCAAAAATCTTGTTTGCCTTCCAGGGTCCACTTGTAATTTGAAATCCCTGAAAGTTCTCAATATTTTAGGTTGCTCAAAATTTTCCTCATTGCCACAAAACATTGAAGAAAATAAGTTCTTGGAGGAGCTTGATTTGAGTGGAACTGCTATAAGGGAAATACCTTCATCCATTGTTAGCCTAAAAAATTTGAAGAAATTATATTCGAATGGATGTAATGGTCTAAGTTCAACATCCAGTTCATTAATAAGGAGCTTGCTTTCCCCAGTTCGCAGCGCATTGGGGTTTGATATTCATGAAGCTCCCACTGCATTGGTTTTGCCTCCTTGCATCTCACGTCTAGCATCGCTGAAGGAATTATTTTTGAGTAGATGCAATCTCAAAGTTGAATCAATTCCAAATGATCTTGGCTGCTTACCATCGTTAGAGGTCTTAGATCTTAGTGGAAATGACTTTAGCAACCTACCCGATGGCAGTTGTGTTCTTCCTCCTTCATTCTCAAGGCTTTCCTCATTGAACTCTTTGAATTTGTCTTACTGCAATCTCCGTGATGGATCAATTCCTGAGAATCTTAGTTGCTTGTCATCATTGACAAAACTTGGTCTAAGCCGTAACAAATTTACCCATCTTCCTGCTGGTTGTGTTGCTAATCTTTCACTCCTATCTCATCTGCATTTGAGTTATTGCCCAAAGCTCAAATACTTGCCAGCTCTTCCGCCAAACCTACTGACGATAGATACAGTTGCTTGTCATTCAATGCCACCATTAACTTTTTCAGAATTTCTATCAGTTCTGATTACAACTACTAATGAATTTTCGAAATCCTTTCCATCAAGGATTTTGGATAACATGGATTTCAAAGCTTGGTGGATCCAGAAGAGTGACGTCCCATCATGGTTCAACAATCAAGACTTTCAATTTCTTCTTAAAGTTGATGGTTTTCAAGACAATCATGTTGTTCAACTTTCTAAGATAGAATTCCCTTGTGATGAATTTGATCATTGTCATTCCAATGTGGTTGGTGGTTTTGTGCCATCTGATTCCATTGTGTCAATAAAAGTAGATGTCTCTCATCTTTGCGGCTCAAGTGCAAGGTGGGGTATTTCTCTTTGCATTGTTCTGCAAGATCTAGACGTTCCTTTATGTGCTGAAGATGTGTTCGTTCGAACACTTCGGCTGACTTACAAATTTTCACAAGATGAATTCTTCAAAAAGGAATCCTCATGGAGAATTGTTATGGGAAACAATCCCAATCAAATGCTGATGATTTATTTTCCTAGGAGTAATTTCAAAGTAATTGACTGTGGACAGATCGAATTCATATTTTATACGCAAAAATATAAGCGCATAAAGAAAGTGCAAGGGTTTGGGAAAGTTGGTCTGCAAAGTCAGAGTACGTTTGTGATAAGCAAGTGTGGGTGGCGCGTGATAAGCGAGGAAGATGTTGAAGAATGGCGCAGATCATCAATGAATGTATGCAGCACTAGTGGTAACAGTGAAATCCCTTCTCAGCATTCTCTTTATGCTTATGGAAAGAGAACCTGTGAAGTTGAAGAAATAGAAGAAGAAGAAGAAGAAGAAGAAGAAAACATAGTGACTAATGAGGAAGCCGAAATATTTTCTGCTAAACGAAGAAGAATGAAATGA 3807 0.3822 MEVPWKYHVFLSFRGEDTRNSFTGHLHAALERRGIITFIDDKLRKGEDISQELLQAIEGSLVSIVILSPDYASSCWCLAELQKILESKRSLGREVVPLFFNIDPSHVRHQRGTIGDAFESHRERFADDKVQGWRDALHEVANISGYDCNHRHEAKLIEEIVADVWAKLQPKLPYCFNNELVGIESRVEEVNSLLGIGLAGVRLIGIWGMPGIGKTTLARTIYERIFREFDICCFLANMKESSETNGFVALQRKLLSKLKIKGMEVDDTYEGKNIIRNMLCNKKVLVVLDDVSEINQLENLCIKQACLAPGSRVIVTTKNKHVLIEHGEFEIYVAELLNNDESVQLFCKKAFKRDEPIEGYWKLCKDIIHYAGGLPLTLEVLGSYFCRRSELEWKEGLEKIKMFPPTDILRRLRISYDALSETEKKIFLDVACCFKGMIKDQVTQIFEICGDLYPILGIRELVEKCLLTEYCCGHGAWRLGMHDILQKMGKSIVVEESPNDAGRRSRLWSLEDVDHVMSKNKGTDLVEIIHLQSHMPYEANWDPEVFSMTRSLTILIILCDVYLPGGLKFLPSSLKILEWKAYPLKSLPDGAHLDELVLLRMHHSKIIQLWGRTQMSKKLKFIDLSYSEEFIRTPDFSMLPNLEQLILKGCVRLSEVHPSLGQHTKVVVLDLNDCKNLKALPIRMEMDSLKKLILSGCLKVKKLPEFGENMTKLLVLDVKNCKNLVCLPGSTCNLKSLKVLNILGCSKFSSLPQNIEENKFLEELDLSGTAIREIPSSIVSLKNLKKLYSNGCNGLSSTSSSLIRSLLSPVRSALGFDIHEAPTALVLPPCISRLASLKELFLSRCNLKVESIPNDLGCLPSLEVLDLSGNDFSNLPDGSCVLPPSFSRLSSLNSLNLSYCNLRDGSIPENLSCLSSLTKLGLSRNKFTHLPAGCVANLSLLSHLHLSYCPKLKYLPALPPNLLTIDTVACHSMPPLTFSEFLSVLITTTNEFSKSFPSRILDNMDFKAWWIQKSDVPSWFNNQDFQFLLKVDGFQDNHVVQLSKIEFPCDEFDHCHSNVVGGFVPSDSIVSIKVDVSHLCGSSARWGISLCIVLQDLDVPLCAEDVFVRTLRLTYKFSQDEFFKKESSWRIVMGNNPNQMLMIYFPRSNFKVIDCGQIEFIFYTQKYKRIKKVQGFGKVGLQSQSTFVISKCGWRVISEEDVEEWRRSSMNVCSTSGNSEIPSQHSLYAYGKRTCEVEEIEEEEEEEEENIVTNEEAEIFSAKRRRMK 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3318g00057 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 705 IPR044974 GO:0006952
Pral3318g00057 1268 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 170 - -
Pral3318g00057 1268 SUPERFAMILY L domain-like 658 974 - -
Pral3318g00057 1268 Gene3D Ribonuclease Inhibitor 562 813 IPR032675 -
Pral3318g00057 1268 Pfam NB-ARC domain 199 401 IPR002182 GO:0043531
Pral3318g00057 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 429 IPR027417 -
Pral3318g00057 1268 PRINTS Disease resistance protein signature 708 724 - -
Pral3318g00057 1268 PRINTS Disease resistance protein signature 371 385 - -
Pral3318g00057 1268 PRINTS Disease resistance protein signature 203 218 - -
Pral3318g00057 1268 PRINTS Disease resistance protein signature 278 292 - -
Pral3318g00057 1268 ProSiteProfiles Leucine-rich repeat profile. 861 882 IPR001611 GO:0005515
Pral3318g00057 1268 SUPERFAMILY L domain-like 564 706 - -
Pral3318g00057 1268 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 146 IPR035897 -
Pral3318g00057 1268 SUPERFAMILY "Winged helix" DNA-binding domain 407 516 IPR036390 -
Pral3318g00057 1268 SMART AAA_5 200 337 IPR003593 GO:0016887
Pral3318g00057 1268 Gene3D - 171 331 IPR027417 -
Pral3318g00057 1268 Pfam TIR domain 6 182 IPR000157 GO:0007165
Pral3318g00057 1268 Coils Coil 1230 1258 - -
Pral3318g00057 1268 Gene3D - 336 420 IPR042197 -
Pral3318g00057 1268 SMART till_3 6 143 IPR000157 GO:0007165
Pral3318g00057 1268 Pfam Leucine Rich repeats (2 copies) 836 876 IPR025875 -
Pral3318g00057 1268 Gene3D - 4 170 IPR035897 -
Pral3318g00057 1268 SMART LRR_typ_2 914 937 IPR003591 -
Pral3318g00057 1268 SMART LRR_typ_2 759 781 IPR003591 -
Pral3318g00057 1268 SMART LRR_typ_2 834 858 IPR003591 -
Pral3318g00057 1268 SMART LRR_typ_2 859 882 IPR003591 -
Pral3318g00057 1268 SMART LRR_typ_2 639 663 IPR003591 -
Pral3318g00057 1268 SMART LRR_typ_2 889 913 IPR003591 -
Pral3318g00057 1268 ProSiteProfiles TIR domain profile. 5 168 IPR000157 GO:0007165
Pral3318g00057 1268 Gene3D Ribonuclease Inhibitor 817 1072 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3318g00057 Pral-Chr3318 1093651 1099451 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3318g00057 7 787 WRKY Transcription Factor Family AT4G12020 31.022 2.59e-92 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3318g00057 - - pcin:129317909 1692.94