Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3318g00053 ATGGAACGAAGGAGGGGAGATGACGTAGGCATAAAAAATGGGAATATAAATTTAGGGAGTGGGAACGAAATAGAGGTTGGGGATGATAATTTGATGTGCCCGCAAGCTGAGGATAGTGACGATGCAGAGTTGGATGATGATTGTTTTCATCAATTTCTTGATGTTGATGTTGAGAATGTAGGTCAAGGAAGTAGGGGTTCTAATCATTTGGCCGAATTTGAATCTGTGCATTCAGAGGCTGTTACTACTTCTGAGTTACCGAATGAGAACACGCTGGCTATGCTTTCCGATCTAGAAGATGATGAGTTGTATGAGGAGTATGCATGTGATGACGAGGACAATAAGGCAATAACAAGGTATGAGAAATACAATTCTGCTCAAATGTGCAAGGAGTTTGAATTTAAGTTGGGCATGGAGTTTAATTCAGTCCAACAGTTTCGAGAAGTGCTCAAGGAGTACTGTTTGCTACATGGGTATGATGTTAAGTTTCTTAAAAATGATAAGGAAAGATGCCGAGTTAGGTGCAAGAAGAAGTGTGGTTGGTTGATACTTGTAAGCAAAGTTGGTGGCTCAATGACTTTTCGAGTGAAAACACTTGGACCAAAGCATACTTGTGGGGTAACATTTAATTCAAGGTTAGCCACATCAAAGTGGGTTTCAAACAAGATAGTAGATCATATGAGGATGAATAAGAATTTGAAGCCAGGAGATGTGGTTTCAATAGTAAAACAAAATTATATGGTGCAACCTTCAATAAACAAGGCATTTTGGGCTAGGAAGATTGCAAAGAAAACAATAGAGGGAGATCACAAAGAAGAGTACAACAAGTTAGTAAACTTTTGTAATGAAGTCAAGAAGAGAAATCCGCAATCTACATTTGCTCTTGTCACTGATACTACTTATTATGTAGATCGGCCACGTGTGTTTAAGAGATTGGGAGAAGACACCAGAAAAGGCTTCACAGACCATTTGCATGCTGCTCTAAAACAAAAGGGTATCATAACTTTCTTAGATGATGGGCTCAACAGAGGAGAGGTTATCTCTGATCAACTCCTCCAAGCAATTGATGAATCTCTCATCTCTCTTGTTGTTCTCTCTCAAAGTTATGCTTCTTCCAGTTGGTGTTTGGATGAACTTGAAAGGATACTTCAATCTAAAAAAACTTTGGGCAGAGAAGTTATCCCAATATTTTATGACATTCATCCATCTGATGTGCGTCATCAAAGAGGTACCTTTGGTTGTGCCCTTCAAAACCATGGTGAGAGATTTGCTAGAAAGAAGCTGCGAAGATGGAGGGATGCCTTAAAAGAAGTTGCAAATATATCTGGCTATGACTCTACAGATCGGCATGAAGCAAAACTCATTGAAGAAATTATAGCAGAAGTATGGGCAAAGTTACAACCTAAATTACTATGTTGTTACAGCTATGACCTCGTTGGCATTGAATCAAGAGTAGAAGAAGTGAATTCACTTTTAAAGCTTGGATTTTGTGATGTTCGCTTAATAGGAATATGGGGCATGCCTGGTATTGGAAAGACAACTCTTGCAAGAATTGTCTATGAGAGAATTTTTCACCAATTTGACCTCAGTTGTTTTCTTGCTGATGTGAAAGAAAGCTCTGAAGCCAAGGGTTTGGTTTCTTTGCAAAGAAAACTTTTCTACAAACTCAAGATAAAAGGCATGGAAGTTGATGATACATATGATGGGAAGAATATAATAAGAAACATGCTATGCAACAAAAAGGTTCTTGTTGTCTTGGATGATGTAAGTGAAATAAACCAACTAGAGAACCTCTGTATAAAGCAAGCTTGGCTGGGTCCTGGGAGTAGAGTAATTGTGACGACTAAAAATATGCATGTGTTGGTAGAGCATGGAGAATTTGAAATTTATGAGGCTGAATTGTTAAACGATGATGAATCTCTCCAACTCTTCTGCAAGAAGGCTTTTAAAAGGGATGAACCTATAGAAGGTTATTGGAAGTTGTGCAAAGACATTATCCACCATGCTCAAGGCCTTCCTCTAACTCTTGAAGTGTTGGGTTCTTATTTTTGTGGAAGAAGTGAACTTGAATGGAAAGAAGGTTTGGAGAAAATTAAAAAGTCTCCACCGAGCAATATTCTGAAGAGACTTAGAATCAATTATGATGCATTAAGTGATACAGAAAAGAAAATATTTTTAGATGTTGCTTGTTGTTTTAAGGGAATGATCAAAGACCACGTGGTACAAATATTCGAAATATGTGGTGATCTTTTTCCAACACTTGGAATAAGAGAACTTGTTGAGAAATGCTTGTTAAAAGAATATTATAGTAATGATGGTGCATGTCATTTGGGTATGCATGATATCCTTCAAAATTTGGGCAGAAGTATTGTTATTGAGGAATCACTTAATGATGCTAGTAGACGTAGCAGGTTATGGTCACTGGAAGATATTGATTATGTGATGTCAAAAAACAATGGTACTAATATGGTAGAACTTATACATCATCAATCACATATGCCATATGAAGCGAATTGGGACCCTAAAGCGTTCTCTATGATGCATAGCCTCACAATACTCATCATATTATGTGACGTGTACCTTCCTCGAGGTCTCGAATTTCTTCCCCGTTCGTTAAAATTTCTCGAATGGAAAGGTTATCCTTTGAGATCTTTGCCTTATGGTGCGCAACTTGATGAACTTGTGCTCCTTAGAATGCATCATAGCAAGATCATGCAACTTTGGGGCTGTACACAAATATCAAAAAAGTTGAAGTTCATTGATTTAAGCTATTCTGAAGATTTCATAAGAACTCCTGATCTCAGGATGCTACCCAACCTTGAGCATCTGATTCTTGAAGGTTGCGTAAAACTCACTGGAGTTCACCCATCACTTGGACAACATAAGAAACTTGTTCTATTGGATTTGAAAGATTGCAAGAATCTTAAAGCTCTTCCAAGTAGAATGGGGATGGATTCATTGGAGAAATTGATCCTTTCTGGCTGCCTCAAAGTTAAAAAGCTTCCAGAATTTGGGGAAAATATGACCAGTTTGTTGGTTCTTGATGTGGAAAATTGCAAAAACCTTGTTTGTCTTCCAAGTTCCACTTGTTATTTGAAATCCCTCAAAGTTCTCAATATTTTAGGTTGCTCAAAATTTTCCTCATTACCACAAAATATTGATGAAAATAAATGTTTAGAGGAGCTTGATTTGAGTGGAACTGCTATAAGGGAAATACCTTCATCCATTGTCGGACTACAAGATTTGAAGCTACTATATTTAAAAGGATGTAAAAGTCTAAGTTCAAGATCCAATTCATTAGTAAGCAGCTTATTTTCCTCGATTAAAGAGGTACTTGGGTTTTATAATGGATCTTCCACAATCTCCTCGTCTCTTTCTTACATTTCTAGTGTAGCAACTTTGAAGGAACTGCATTTAGATGACTGTAACCTTAAAGTTGGATCAATTCCAGATGAACTTGGTTGTTTAACATCATTGGAGACTCTCAGTCTAAGAAGAAATGATTTTGGCAATGCATCTACTAATAACTGCGTACTTCCTCCTTCATTCTCACGTCTTTCTTCATTGAAGTATTTATACATGTGTTGTTGTAATCTCAATGATGGTTCAATTCCGAAGGACCTTAATAGCTTATTATCATTGGAAAGACTTGGTCTGTTAGGAAACAATTTTACACATATACCTGCTGATTGTATCTCTAACCTCTTGCATCTTCATACTCTTCATTTGAGTCACTGCCCAAGGCTTAAGTGTTTGCCAAATCTTCCACCAAATTTACGACGTATAGATACTGTTGCATGTCAGTCAATGCAATCTTTGTCATTTCCAGAGTTGCTATTGAAGTGCATTGCTTTTGCAAATGCTTCTGTGGTGGACACAAATAACATACGATGTAGCATCTGGTGGATTCTAGGAAGTCAAATCCCATCATGGTTCCACAATCAAGACTTTCAAGTTCTTGATAAAATTGATGGCTTTCAAGATAACCATGTTGTCCAAACCTTTGAGGAAGAAAACTCGTATCAGAGTTTTCATGACACTGAGAATGGTGATTTTGTACAAGCTGATTCCATTGTGTCAATGGAAGTAAATATCGCTGATTTTCATGGTTCAAGTGGAAGTTGGGGAACTTCTCTTTGCGTTGTTCTACAAGATATGGGCCTTGATGATGCGTTTGATCTTTACCTTAAGATGACTTGTAAAGCTTCAGGAGATGAATTCTTCAAAAAAGAGATAGGATGGCCTGTTTCTTTTGAAGGCCATTCCCATCAAATTTTGATCATGTTCTTGCCCTCCATCAATTTTGCAGATGATTGCAACAAGGTTGAAGTCGTATTTTACACTACACGAATTATGCGCACCGACAGTGAAGCGGAATTAGATGTGAAAGCTGATTACGGAGATCATGGCAAGCGTACAATAAGCAAGTGTGGCTGGCGAGTGACACGCAAGGAAGATGTAGAAGAATGGCTCAGAACAATCCAACAATATCGCAGCAGTACCAGTGAAAACAATGAAATCCTTTCTCAACAATTTGTTCATGGAAGAAAGAGATACCGTGAGGGAGAAGATCTGCAAGAAGAAGTCACTATCAATGATGTGGAAACAGAAATAAATTCAACTCCTCGGAGAAAACTTAAATTGTTTCCTTGA 4653 0.377 MERRRGDDVGIKNGNINLGSGNEIEVGDDNLMCPQAEDSDDAELDDDCFHQFLDVDVENVGQGSRGSNHLAEFESVHSEAVTTSELPNENTLAMLSDLEDDELYEEYACDDEDNKAITRYEKYNSAQMCKEFEFKLGMEFNSVQQFREVLKEYCLLHGYDVKFLKNDKERCRVRCKKKCGWLILVSKVGGSMTFRVKTLGPKHTCGVTFNSRLATSKWVSNKIVDHMRMNKNLKPGDVVSIVKQNYMVQPSINKAFWARKIAKKTIEGDHKEEYNKLVNFCNEVKKRNPQSTFALVTDTTYYVDRPRVFKRLGEDTRKGFTDHLHAALKQKGIITFLDDGLNRGEVISDQLLQAIDESLISLVVLSQSYASSSWCLDELERILQSKKTLGREVIPIFYDIHPSDVRHQRGTFGCALQNHGERFARKKLRRWRDALKEVANISGYDSTDRHEAKLIEEIIAEVWAKLQPKLLCCYSYDLVGIESRVEEVNSLLKLGFCDVRLIGIWGMPGIGKTTLARIVYERIFHQFDLSCFLADVKESSEAKGLVSLQRKLFYKLKIKGMEVDDTYDGKNIIRNMLCNKKVLVVLDDVSEINQLENLCIKQAWLGPGSRVIVTTKNMHVLVEHGEFEIYEAELLNDDESLQLFCKKAFKRDEPIEGYWKLCKDIIHHAQGLPLTLEVLGSYFCGRSELEWKEGLEKIKKSPPSNILKRLRINYDALSDTEKKIFLDVACCFKGMIKDHVVQIFEICGDLFPTLGIRELVEKCLLKEYYSNDGACHLGMHDILQNLGRSIVIEESLNDASRRSRLWSLEDIDYVMSKNNGTNMVELIHHQSHMPYEANWDPKAFSMMHSLTILIILCDVYLPRGLEFLPRSLKFLEWKGYPLRSLPYGAQLDELVLLRMHHSKIMQLWGCTQISKKLKFIDLSYSEDFIRTPDLRMLPNLEHLILEGCVKLTGVHPSLGQHKKLVLLDLKDCKNLKALPSRMGMDSLEKLILSGCLKVKKLPEFGENMTSLLVLDVENCKNLVCLPSSTCYLKSLKVLNILGCSKFSSLPQNIDENKCLEELDLSGTAIREIPSSIVGLQDLKLLYLKGCKSLSSRSNSLVSSLFSSIKEVLGFYNGSSTISSSLSYISSVATLKELHLDDCNLKVGSIPDELGCLTSLETLSLRRNDFGNASTNNCVLPPSFSRLSSLKYLYMCCCNLNDGSIPKDLNSLLSLERLGLLGNNFTHIPADCISNLLHLHTLHLSHCPRLKCLPNLPPNLRRIDTVACQSMQSLSFPELLLKCIAFANASVVDTNNIRCSIWWILGSQIPSWFHNQDFQVLDKIDGFQDNHVVQTFEEENSYQSFHDTENGDFVQADSIVSMEVNIADFHGSSGSWGTSLCVVLQDMGLDDAFDLYLKMTCKASGDEFFKKEIGWPVSFEGHSHQILIMFLPSINFADDCNKVEVVFYTTRIMRTDSEAELDVKADYGDHGKRTISKCGWRVTRKEDVEEWLRTIQQYRSSTSENNEILSQQFVHGRKRYREGEDLQEEVTINDVETEINSTPRRKLKLFP 1550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3318g00053 1550 Pfam MuDR family transposase 132 195 IPR004332 -
Pral3318g00053 1550 SMART till_3 305 441 IPR000157 GO:0007165
Pral3318g00053 1550 Gene3D - 309 470 IPR035897 -
Pral3318g00053 1550 PRINTS Disease resistance protein signature 669 683 - -
Pral3318g00053 1550 PRINTS Disease resistance protein signature 501 516 - -
Pral3318g00053 1550 PRINTS Disease resistance protein signature 576 590 - -
Pral3318g00053 1550 PRINTS Disease resistance protein signature 1006 1022 - -
Pral3318g00053 1550 Pfam NB-ARC domain 484 703 IPR002182 GO:0043531
Pral3318g00053 1550 Gene3D Ribonuclease Inhibitor 1044 1274 IPR032675 -
Pral3318g00053 1550 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 313 1003 IPR044974 GO:0006952
Pral3318g00053 1550 SUPERFAMILY L domain-like 1107 1298 - -
Pral3318g00053 1550 FunFam Disease resistance protein (TIR-NBS-LRR class) 303 468 - -
Pral3318g00053 1550 Gene3D - 472 628 IPR027417 -
Pral3318g00053 1550 SUPERFAMILY L domain-like 779 1170 - -
Pral3318g00053 1550 Gene3D Ribonuclease Inhibitor 819 1043 IPR032675 -
Pral3318g00053 1550 SUPERFAMILY Toll/Interleukin receptor TIR domain 313 444 IPR035897 -
Pral3318g00053 1550 ProSiteProfiles TIR domain profile. 303 466 IPR000157 GO:0007165
Pral3318g00053 1550 Gene3D - 634 718 IPR042197 -
Pral3318g00053 1550 Pfam TIR domain 311 469 IPR000157 GO:0007165
Pral3318g00053 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 727 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3318g00053 Pral-Chr3318 980712 1003826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3318g00053 234 1101 WRKY Transcription Factor Family AT4G12020 31.347 4.47e-104 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3318g00053 - - pcin:129317909 1504.58