Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00015 ATGATGAAGCACTTTTCTGTTAAGATTCCATTTTTCCTTCTCTTCCTCCTCTATTCTTCTTGTCGGTCCCTAAACACAATATCCACAAACCAGCCCCTCAAAGATGGCGACGTATTGCTCTCTAAGGGAGCAATATTTGCCCTCGGTTTCTTCAGCCCCAATAATAACTCCAAGAACCGCTACCTCGGAATATGGTACAACAATGTTCCGAAACAAACTGTTGTTTGGGTAGCTAACAGAGGCAATCCTTTGAATGATACTTCTGGAGTTTTCTCTATCAACATCCATGGAAACCTGGTTCTTAACCATACCAATCGAAACCTCAACCCCATTTGGTCTACCCATGTTTCGGTCTCATCATCGCCCCTTGATAGCTTTGCTAAACTTTTAGATACTGGCAATTTGGTTCTAAGAGATAGAGGAGGAAGGCAAAAGGTTCTATGGCAGAGTTTTGATTATCCCTGTGACACTTTGCTTCCGTTTGCGAAACTTGGTTTGGACCGAAAAGCCGGTTTGGACCGGATCTTGACGTCTTGGAAATCCCCTGATAATCCATCACTTGGAAGTGTAACCATGAGGATAGACCCGACAGGATATCCTCAAGCTTTCATGTATAAAAACGGAGTTCCATTCTGGCGGGTCGGGTCATGGGCAGGTCAAAGATGGAGCGGTATTGTCGTGATGAAACCCGACCCCGTCTTGTATGTGGTCTTTATTAACAACGCCAATGAAGTTACTGTAATGAATGGCGTCAAAATGCTCGAGGACCCTTCTATCTTCATAAGAATTATGCTCGAGGAAACGGGTCGGATAACAAGAACCATTTGGCTAGCTCAAGAAAATAGATGGCTTGAAGTCTGGTATGATCCCACAGAAGAATGCGATAGATTTAGAAAATGTGGATCAAATAGTATTTGTGATCCTTATAATAGTAAAAAGTTTCAATGTTTGTGTCTGCCTGGATTCGACAAGAACCTAAGAAATGGATCAGCAAGCGGGTGTGTGAGGAAGAAAAATGTGTCCACGTGTCGAAGTGGGGAAGGGTTTGTGAAGGTGGCAAGTTTGAAGGTGCCAGAGACGTCGAAGGCACTTGTGGATAACAATGTGAACATGAGCTTGAATGGTTGCAAAGAGAAATGCTTGAAGGATTGTTCATGTAAAGCATACACAAGTGTGAATGAAATCACGCAGAGAGGTTGTTTGACATGGCACAATGACATGGAAGATATTAGAAAATTTAATGGCGGGGGACAAGACTTATACGTGCGTGTGGATGCAGTTGAGTTAGCCAAATATGAAAGGAAGCCCTACGGTTCTCTTGGCAAGAAGGGGTTGGTGACAATCATAGTTCTCTCTACTTTGTTGTTTATACTTGTGACGACCTCTTTCTTGTACTGGTTTGCAAAGAAACGGAGGCATGCGGCGAAAGGAACACATACCAACTATGTGCTTGATAGAGAACGCAATTCAAATTTATTATTATTCAATCTAAGTGACATAATTGAAGCAACAAACAATTTCTCTGTCGCTAACATGATTGGAAAAGGCGGTTTTGGATTTGTTTACAAGGGCATACTCCGTGATGGAATGGAGATAGCAGTAAAGAAGTTGTCAAAGTATTCTGATCAAAGCATTGAAGAATTCAAAAATGAGGTTGCTATAATGACAAAGCTCCAACATAAGAATCTTGTAAGGATCTTAGGTTGCTGCATACAAGGAGAAGATAACATGTTGATCTATGAATATTTACCAAACAAAAGCTTGGACTCTTTCATTTTTGATCAAGCAAAAAAATTACAACTAGATTGGAGGATGCGATTTGATATCATTTGTGGGATTGCAAGAGGGATCTTGTACCTTCATCAAGATTCAAGATTAAAAATAATTCATAGAGACTTAAAGGCTAGCAATATCTTGTTAGACCATGCATTGAACCCGAAAATTACTGATTTTGGTATGGCTCGAATATTTGGTGAAGATCAAATTGAAGCAAGCACAAATCGCGTTGTGGGAACTTATGGTTATATGTCTCCTGAATATGCAATGGAAGGATTATTTTCAATAAAGTCTGATGTATACGGCTTTGGAGTTCTACTTCTTGAAATTATTGCCAGCAGAAAGAATGGCGGCCATTATGATGATATTACTTCTACTTTGGTTAAACATATTTGGGACTTATGGAGAGAGAATAGAGCCATGGAGATCATAGATCCATCCTTAAAATATGAGACATGCCTTGAATATGATGATGAAGTTCTAAAATGCATCCAGATTGGATTGTTATGCGTGCAAGAGTATGCGTCAGATAGGCCAACTATGCTAGAAGTCGTTTCGATGTTGGAGAATGACTCCACTCTTCCTCCTCCCAAACAACCAGCATTCGTTTTCAAGGAAACTACTCGTGATCATTCAAATCAATCAATTGGCGAAGAAGCAAATAATTCTTTATGTGGAATGAGTACTTCTGTGATTGAAGCTCGCTGA 2484 0.403 MMKHFSVKIPFFLLFLLYSSCRSLNTISTNQPLKDGDVLLSKGAIFALGFFSPNNNSKNRYLGIWYNNVPKQTVVWVANRGNPLNDTSGVFSINIHGNLVLNHTNRNLNPIWSTHVSVSSSPLDSFAKLLDTGNLVLRDRGGRQKVLWQSFDYPCDTLLPFAKLGLDRKAGLDRILTSWKSPDNPSLGSVTMRIDPTGYPQAFMYKNGVPFWRVGSWAGQRWSGIVVMKPDPVLYVVFINNANEVTVMNGVKMLEDPSIFIRIMLEETGRITRTIWLAQENRWLEVWYDPTEECDRFRKCGSNSICDPYNSKKFQCLCLPGFDKNLRNGSASGCVRKKNVSTCRSGEGFVKVASLKVPETSKALVDNNVNMSLNGCKEKCLKDCSCKAYTSVNEITQRGCLTWHNDMEDIRKFNGGGQDLYVRVDAVELAKYERKPYGSLGKKGLVTIIVLSTLLFILVTTSFLYWFAKKRRHAAKGTHTNYVLDRERNSNLLLFNLSDIIEATNNFSVANMIGKGGFGFVYKGILRDGMEIAVKKLSKYSDQSIEEFKNEVAIMTKLQHKNLVRILGCCIQGEDNMLIYEYLPNKSLDSFIFDQAKKLQLDWRMRFDIICGIARGILYLHQDSRLKIIHRDLKASNILLDHALNPKITDFGMARIFGEDQIEASTNRVVGTYGYMSPEYAMEGLFSIKSDVYGFGVLLLEIIASRKNGGHYDDITSTLVKHIWDLWRENRAMEIIDPSLKYETCLEYDDEVLKCIQIGLLCVQEYASDRPTMLEVVSMLENDSTLPPPKQPAFVFKETTRDHSNQSIGEEANNSLCGMSTSVIEAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00015 827 SMART serkin_6 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00015 827 Gene3D Transferase(Phosphotransferase) domain 1 583 787 - -
Pral330g00015 827 Pfam PAN-like domain 343 410 IPR003609 -
Pral330g00015 827 Gene3D - 21 151 IPR036426 -
Pral330g00015 827 Pfam Protein tyrosine and serine/threonine kinase 509 780 IPR001245 GO:0004672|GO:0006468
Pral330g00015 827 Pfam D-mannose binding lectin 73 180 IPR001480 -
Pral330g00015 827 SUPERFAMILY Protein kinase-like (PK-like) 482 781 IPR011009 -
Pral330g00015 827 SMART blect_4 30 154 IPR001480 -
Pral330g00015 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 151 - -
Pral330g00015 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Pral330g00015 827 CDD STKc_IRAK 513 782 - -
Pral330g00015 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 771 - -
Pral330g00015 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 582 - -
Pral330g00015 827 FunFam Liguleless narrow1 583 787 - -
Pral330g00015 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pral330g00015 827 CDD PAN_AP_plant 341 424 - -
Pral330g00015 827 Pfam S-locus glycoprotein domain 212 324 IPR000858 GO:0048544
Pral330g00015 827 CDD B_lectin 30 154 IPR001480 -
Pral330g00015 827 ProSiteProfiles Protein kinase domain profile. 507 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00015 827 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Pral330g00015 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Pral330g00015 827 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Pral330g00015 827 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Pral330g00015 827 SMART ntp_6 344 424 IPR003609 -
Pral330g00015 827 Gene3D Phosphorylase Kinase; domain 1 468 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00015 Pral-Chr330 170873 174953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00015 471 818 Receptor kinase-like Gene Family AT4G11530 52.975 3.10e-118 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00015 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00015 - - pcin:129286370 1100.5