Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00014 ATGAAGGTTCAAGATTCACATGGAGGAGACGAAGTCCCTTTTCACCCTCTTCTTTCTCGCCACTTTCTCATGGAAGAAACAAAGTTCTCCTTCACCCTCTTCTTTCTTGCCACTTGTTTCTCTCTGATATCCTTGTTTCCAACAGTTTTGAAAGCAAAGGATTCCATAACTTCAGCGCAATCCATCACTGATAGCCAGACACTAGTTTCTCCTGATGAAAAATTTGAACTTGGATTCTTCAGTCCTGGCAATTCCAGTTTGAAATATCTGGGAATATGGTACAAGTATATCCCAAAGCCTACTGTTATTTGGGTTGCAAACAGGGACAGTCCACTTGTGAATTCTAGTGGCACTTTAACATTCAGCAATGATGGTAAGCTTGTCATTCTCAGTCATACAGGAAGTATCATATGGTCTGCAAACTCATCCAGATCGCCAAGGAAACCATTAGCTCAGCTTCTAGATTCTGGAAATTTAGTCTTGAGAGACCTTGAGGATGAAAGCTCTGTGAGTTACAGATGGCAGAGTTTTGATTATCCATCTGATACATTCATTCCAGGAATGAGACTTGGTTGGAACTTCAAAACCGGCTTCAGCAGACACTTAACCTCTTGGAAAAGCCATGATGATCCTTCTTCTGGAGAGTATAGTTATAGTGTGGACCCACGCGGCCTTCCTCAGCTTTTTCTTCTTAAAGGAAAGAAGAAGGTCTTTAGAAGTGGACCATGGTTTGCACAACAACTCAAAGGTGACCCAGCTCTTATGGACAACCCAGTTTTCAAACCTGTTTTTGTTTTTAATTCTGATGAAGTGATTTTCACGTATGAAACTAAGGACAGTGTCACTTCAAGATTTGTACTTACTCAATCTGGTTTGATTCAGCACTTCTCATGGAGTGATCCTCGTTCCAGTTGGATCCCAGAATTTTCAGTTCAAGGAGATCGTTGTGATGATTATGGCATTTGCGGTGCCTATGGAAGTTGCACCATAAGAGAATCGCCAATTTGCAAGTGTATGGATGGATTTGAGCCTAGGTTACCTCAAGACTGGCAAAAAAATGAATGGTCAGATGGATGTGTTATGAAGAATTCTCATACTTGCAGAAATGGAGAGGGATTTAAGAAGCTTACAGGAGTAAAACTGCCAGATTCTGCTGTGTTTCACACAAACTCAAGCTTGAGTTTTGAGGAGTGTGAGACAGAGTGCTTGAAGAACTGTTCTTGTGTTGCTTATGCTACACTAGATATCAATACAACCGGCAAAGGATGCATTTCTTGGTTTGGGGTTTTATTTGATATCAGAGAGGTTGCATATTATGGACAAGATCTCTACATCAGAGTTCCAGCTTCAGAACTAGGTTCAAATGCTGCTGTCCCGAAAAGAAATAAACATATAATAATTATTGTAGCTGTATCAGTAAGCTCAGCAATTGTTGTCTTGGTATCATGGTTCATAATTAAGAGATGGAGAATTCGAGAGACAGATATTCAACTGATACTTAACAGACCTAGAAGTGAACTCCCATCATTCAAGATTGACATTATTGAAGCAGCAACAAAGAAGTTCTCAGCCTGCAATAAGATTGGAGAAGGTGGATTTGGTCCCGTATACAGAGGTAAACTTGCATCAGGGCAAGAAATAGCTGTGAAAAGACTCTCTGAAAGTTCAGGACAAGGCTTGCAAGAGTTCAAGAATGAGGTTGCTATGATATCCCTACTTCAGCATCGAAATCTTGTCAAACTTCTAGGTTGCTGTATTCATAAAGATGAAAGAATGTTGATCTATGAGTACATGCCAAATCGAAGCTTAGACTCTTTACTATTTGATGAAACAAAGCGTTCAACACTCACTTGGCAAAAGAGACTGGATATTATTGTTGGAGTTGCGAGAGGAATCCTTTATCTTCATAGGGATTCAAGACTCAAAATAATTCATAGAGATTTGAAAGCCAGCAATGTTCTTTTAGATAGTGAAATGAATCCCAAAATTTCTGACTTTGGAATGGCAAGAATATTTGGTGGAGACCAAACTGAAGCAAAGACTAATAGAGTAGTTGGAACCTATGGATATATGCCACCTGAGTATGCGATAGATGGACACTTCTCATTCAAATCAGACGTCTTCAGCTTTGGTGTTTTGCTGTTAGAGCTGTTGAGCGGCAAGAAAAATAAAGGATTTTTCCATCCAGATCACAAGCTGAATCTCCTTGGCCATGCATGGAAGCTTTGGACTGAAGAGAAGGCAATGGAGCTGATGGATCCATTACTTGAGAATCAGTTTCCGGCATCAGAAGGTCTACGGTGTATCCAAGTGGGACTTTGTTGCGTTCAACAGAAGCCGGAGGACCGACCAACAATGTCACAAGTGATTTTGATGTTAGACAGTGAAAGTGTCTTTCTGCCACAACCTGGACGACCAGGAATGTATTCAGAGAGATGTTTCTCTGAGACAGATTCATCATCACTCGCAGGAATCAATTCTTGTTCCAATAACACAAGCATCACCTTACAGGAGGGGCGTTAG 2523 0.4063 MKVQDSHGGDEVPFHPLLSRHFLMEETKFSFTLFFLATCFSLISLFPTVLKAKDSITSAQSITDSQTLVSPDEKFELGFFSPGNSSLKYLGIWYKYIPKPTVIWVANRDSPLVNSSGTLTFSNDGKLVILSHTGSIIWSANSSRSPRKPLAQLLDSGNLVLRDLEDESSVSYRWQSFDYPSDTFIPGMRLGWNFKTGFSRHLTSWKSHDDPSSGEYSYSVDPRGLPQLFLLKGKKKVFRSGPWFAQQLKGDPALMDNPVFKPVFVFNSDEVIFTYETKDSVTSRFVLTQSGLIQHFSWSDPRSSWIPEFSVQGDRCDDYGICGAYGSCTIRESPICKCMDGFEPRLPQDWQKNEWSDGCVMKNSHTCRNGEGFKKLTGVKLPDSAVFHTNSSLSFEECETECLKNCSCVAYATLDINTTGKGCISWFGVLFDIREVAYYGQDLYIRVPASELGSNAAVPKRNKHIIIIVAVSVSSAIVVLVSWFIIKRWRIRETDIQLILNRPRSELPSFKIDIIEAATKKFSACNKIGEGGFGPVYRGKLASGQEIAVKRLSESSGQGLQEFKNEVAMISLLQHRNLVKLLGCCIHKDERMLIYEYMPNRSLDSLLFDETKRSTLTWQKRLDIIVGVARGILYLHRDSRLKIIHRDLKASNVLLDSEMNPKISDFGMARIFGGDQTEAKTNRVVGTYGYMPPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWTEEKAMELMDPLLENQFPASEGLRCIQVGLCCVQQKPEDRPTMSQVILMLDSESVFLPQPGRPGMYSERCFSETDSSSLAGINSCSNNTSITLQEGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00014 840 Gene3D Phosphorylase Kinase; domain 1 486 597 - -
Pral330g00014 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Pral330g00014 840 Pfam S-locus glycoprotein domain 238 345 IPR000858 GO:0048544
Pral330g00014 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 102 211 IPR036426 -
Pral330g00014 840 SUPERFAMILY Protein kinase-like (PK-like) 505 802 IPR011009 -
Pral330g00014 840 SMART serkin_6 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00014 840 ProSiteProfiles Bulb-type lectin domain profile. 53 174 IPR001480 -
Pral330g00014 840 Gene3D Hepatocyte Growth Factor 364 443 - -
Pral330g00014 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pral330g00014 840 CDD B_lectin 60 180 IPR001480 -
Pral330g00014 840 SMART ntp_6 368 447 IPR003609 -
Pral330g00014 840 Pfam D-mannose binding lectin 101 206 IPR001480 -
Pral330g00014 840 PIRSF SRK 25 840 IPR024171 GO:0004674
Pral330g00014 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 48 177 - -
Pral330g00014 840 Pfam Protein tyrosine and serine/threonine kinase 525 791 IPR001245 GO:0004672|GO:0006468
Pral330g00014 840 Pfam PAN-like domain 367 433 IPR003609 -
Pral330g00014 840 ProSiteProfiles PAN/Apple domain profile. 367 448 IPR003609 -
Pral330g00014 840 SMART blect_4 59 180 IPR001480 -
Pral330g00014 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 39 784 - -
Pral330g00014 840 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00014 840 CDD PAN_AP_plant 368 448 - -
Pral330g00014 840 CDD STKc_IRAK 528 794 - -
Pral330g00014 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 597 - -
Pral330g00014 840 Gene3D Transferase(Phosphotransferase) domain 1 598 799 - -
Pral330g00014 840 Gene3D - 48 177 IPR036426 -
Pral330g00014 840 ProSiteProfiles EGF-like domain profile. 312 348 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00014 Pral-Chr330 139493 143549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00014 462 807 Receptor kinase-like Gene Family AT4G23230 52.874 5.72e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00014 PK_Tyr_Ser-Thr 8.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00014 - - gmx:100804024 1229.54