Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00013 ATGAAGGTTCAAGATTCACATGGAGGAGACGAAGTCCCTTTTCACCCTCTTCTTTCTCGCCACTTTCTCATGGAAGAAACAAAGTTCTCCTTCACCCTCTTCTTTCTTGCCACTTGTTTCTCTCTGATATCCTTGTTTCCAACAGTTTTGAAAGCAAAGGATTCCATAACTTCAGCGCAATCCATCACTGATAGCCAGACACTAGTTTCTCCTGATGAAAAATTTGAACTTGGATTCTTCAGTCCTGGCAATTCCAGTTTGAAATATCTGGGAATATGGTACAAGTATATCCCAAAGCCTACTGTTATTTGGGTTGCAAACAGGGACAGTCCACTTGTGAATTCTAGTGGCACTTTAACATTCAGCAATGATGGTAAGCTTGTCATTCTCAGTCATACAGGAAGTATCATATGGTCTGCAAACTCATCCAGATCGCCAAGGAAACCATTAGCTCAGCTTCTAGATTCTGGAAATTTAGTCTTGAGAGACCTTGAGGATGAAAGCTCTGTGAGTTACAGATGGCAGAGTTTTGATTATCCATCTGATACATTCATTCCAGGAATGAGACTTGGTTGGAACTTCAAAACCGGCTTCAGCAGACACTTAACCTCTTGGAAAAGCCATGATGATCCTTCTTCTGGAGAGTATAGTTATAGTGTGGACCCACGCGGCCTTCCTCAGCTTTTTCTTCTTAAAGGAAAGAAGAAGGTCTTTAGAAGTGGACCATGGTTTGCACAACAACTCAAAGGTGACCCAGCTCTTATGGACAACCCAGTTTTCAAACCTGTTTTTGTTTTTAATTCTGATGAAGTGATTTTCACGTATGAAACTAAGGACAGTGTCACTTCAAGATTTGTACTTACTCAATCTGGTTTGATTCAGCACTTCTCATGGAGTGATCCTCGTTCCAGTTGGATCCCAGAATTTTCAGTTCAAGGAGATCGTTGTGATGATTATGGCATTTGCGGTGCCTATGGAAGTTGCACCATAAGAGAATCGCCAATTTGCAAGTGTATGGATGGATTTGAGCCTAGGTTACCTCAAGACTGGCAAAAAAATGAATGGTCAGATGGATGTGTTATGAAGAATTCTCATACTTGCAGAAATGGAGAGGGATTTAAGAAGCTTACAGGAGTAAAACTGCCAGATTCTGCTGTGTTTCACACAAACTCAAGCTTGAGTTTTGAGGAGTGTGAGACAGAGTGCTTGAAGAACTGTTCTTGTGTTGCTTATGCTACACTAGATATCAATACAACCGGCAAAGGATGCATTTCTTGGTTTGGGGTTTTATTTGATATCAGAGAGGTTGCATATTATGGACAAGATCTCTACATCAGAGTTCCAGCTTCAGAACTAGGTAAGAAATTTGATGATATAGTCCTGAGTAGGGTTACAGATTCTCTAGTTCTGCAATTTTCTTGGGCCAGGCTTTTCGGCGTTAGATGTTCGTGTTCTAATGTATGTATATTGCTGTCAGGTTCAAATGCTGCTGTCCCGAAAAGAAATAAACATATAATAATTATTGTAGCTGTATCAGTAAGCTCAGCAATTGTTGTCTTGGTATCATGGTTCATAATTAAGAGATGGAGAATTCGAGAGACAGATATTCAACTGATACTTAACAGACCTAGAAGTGAACTCCCATCATTCAAGATTGACATTATTGAAGCAGCAACAAAGAAGTTCTCAGCCTGCAATAAGATTGGAGAAGGTGGATTTGGTCCCGTATACAGAGGTAAACTTGCATCAGGGCAAGAAATAGCTGTGAAAAGACTCTCTGAAAGTTCAGGACAAGGCTTGCAAGAGTTCAAGAATGAGGTTGCTATGATATCCCTACTTCAGCATCGAAATCTTGTCAAACTTCTAGGTTGCTGTATTCATAAAGATGAAAGAATGTTGATCTATGAGTACATGCCAAATCGAAGCTTAGACTCTTTACTATTTGATGAAACAAAGCGTTCAACACTCACTTGGCAAAAGAGACTGGATATTATTGTTGGAGTTGCGAGAGGAATCCTTTATCTTCATAGGGATTCAAGACTCAAAATAATTCATAGAGATTTGAAAGCCAGCAATGTTCTTTTAGATAGTGAAATGAATCCCAAAATTTCTGACTTTGGAATGGCAAGAATATTTGGTGGAGACCAAACTGAAGCAAAGACTAATAGAGTAGTTGGAACCTATGGATATATGCCACCTGAGTATGCGATAGATGGACACTTCTCATTCAAATCAGACGTCTTCAGCTTTGGTGTTTTGCTGTTAGAGCTGTTGAGCGGCAAGAAAAATAAAGGATTTTTCCATCCAGATCACAAGCTGAATCTCCTTGGCCATGCATGGAAGCTTTGGACTGAAGAGAAGGCAATGGAGCTGATGGATCCATTACTTGAGAATCAGTTTCCGGCATCAGAAGGTCTACGGTGTATCCAAGTGGGACTTTGTTGCGTTCAACAGAAGCCGGAGGACCGACCAACAATGTCACAAGTGATTTTGATGTTAGACAGTGAAAGTGTCTTTCTGCCACAACCTGGACGACCAGGAATGTATTCAGAGAGATGTTTCTCTGAGACAGATTCATCATCACTCGCAGGAATCAATTCTTGTTCCAATAACACAAGCATCACCTTACAGGAGGGGCGTTAG 2643 0.4056 MKVQDSHGGDEVPFHPLLSRHFLMEETKFSFTLFFLATCFSLISLFPTVLKAKDSITSAQSITDSQTLVSPDEKFELGFFSPGNSSLKYLGIWYKYIPKPTVIWVANRDSPLVNSSGTLTFSNDGKLVILSHTGSIIWSANSSRSPRKPLAQLLDSGNLVLRDLEDESSVSYRWQSFDYPSDTFIPGMRLGWNFKTGFSRHLTSWKSHDDPSSGEYSYSVDPRGLPQLFLLKGKKKVFRSGPWFAQQLKGDPALMDNPVFKPVFVFNSDEVIFTYETKDSVTSRFVLTQSGLIQHFSWSDPRSSWIPEFSVQGDRCDDYGICGAYGSCTIRESPICKCMDGFEPRLPQDWQKNEWSDGCVMKNSHTCRNGEGFKKLTGVKLPDSAVFHTNSSLSFEECETECLKNCSCVAYATLDINTTGKGCISWFGVLFDIREVAYYGQDLYIRVPASELGKKFDDIVLSRVTDSLVLQFSWARLFGVRCSCSNVCILLSGSNAAVPKRNKHIIIIVAVSVSSAIVVLVSWFIIKRWRIRETDIQLILNRPRSELPSFKIDIIEAATKKFSACNKIGEGGFGPVYRGKLASGQEIAVKRLSESSGQGLQEFKNEVAMISLLQHRNLVKLLGCCIHKDERMLIYEYMPNRSLDSLLFDETKRSTLTWQKRLDIIVGVARGILYLHRDSRLKIIHRDLKASNVLLDSEMNPKISDFGMARIFGGDQTEAKTNRVVGTYGYMPPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWTEEKAMELMDPLLENQFPASEGLRCIQVGLCCVQQKPEDRPTMSQVILMLDSESVFLPQPGRPGMYSERCFSETDSSSLAGINSCSNNTSITLQEGR 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00013 880 Gene3D Phosphorylase Kinase; domain 1 526 637 - -
Pral330g00013 880 SUPERFAMILY alpha-D-mannose-specific plant lectins 102 211 IPR036426 -
Pral330g00013 880 SMART serkin_6 562 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00013 880 Pfam PAN-like domain 367 433 IPR003609 -
Pral330g00013 880 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 48 177 - -
Pral330g00013 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Pral330g00013 880 Gene3D Transferase(Phosphotransferase) domain 1 638 839 - -
Pral330g00013 880 ProSiteProfiles Bulb-type lectin domain profile. 53 174 IPR001480 -
Pral330g00013 880 CDD STKc_IRAK 568 834 - -
Pral330g00013 880 CDD B_lectin 60 180 IPR001480 -
Pral330g00013 880 SMART ntp_6 368 447 IPR003609 -
Pral330g00013 880 Gene3D Hepatocyte Growth Factor 364 443 - -
Pral330g00013 880 Pfam Protein tyrosine and serine/threonine kinase 565 831 IPR001245 GO:0004672|GO:0006468
Pral330g00013 880 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 527 637 - -
Pral330g00013 880 Pfam S-locus glycoprotein domain 238 345 IPR000858 GO:0048544
Pral330g00013 880 Pfam D-mannose binding lectin 101 206 IPR001480 -
Pral330g00013 880 SUPERFAMILY Protein kinase-like (PK-like) 545 842 IPR011009 -
Pral330g00013 880 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 638 841 - -
Pral330g00013 880 PIRSF SRK 25 880 IPR024171 GO:0004674
Pral330g00013 880 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 39 824 - -
Pral330g00013 880 ProSiteProfiles PAN/Apple domain profile. 367 448 IPR003609 -
Pral330g00013 880 Gene3D - 48 177 IPR036426 -
Pral330g00013 880 SMART blect_4 59 180 IPR001480 -
Pral330g00013 880 CDD PAN_AP_plant 368 448 - -
Pral330g00013 880 ProSiteProfiles Protein kinase domain profile. 562 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00013 880 ProSiteProfiles EGF-like domain profile. 312 348 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00013 Pral-Chr330 139442 143549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00013 502 847 Receptor kinase-like Gene Family AT4G23230 52.874 1.63e-124 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00013 PK_Tyr_Ser-Thr 9.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00013 - - gmx:100804024 1223.38