Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00012 ATGAAGATAGCAAATGGGATGGTTATTTTTTCTGTTATAATCCATCACTGTGTCTTGTTTTGTGCTGCTTCTGACATCATAACCAGTGACAATCCCGTAAGCGATGGTGAGCTTCTGATTTCTAAAGAAAACAAGTTTGCTCTTGGGTTCTTCACTCCTGGCAAATCAAACTATCGATATATAGGAATTTGGTACTACAATTTGCCAGAGAAAACTGTTGTTTGGGTGGCTAACAGAGATGATCCCTTGCATGACACCTCTGGAGTTCTGTCCATCAACTCAAATGGAAATCTAATTCTCCATCACAACTACTCTGACTTCCCCATTTGGTCTGCGAATGTTTCTATCACTGTTCCACATGCAACAATTATGGCTCAGCTCACAGATTTAGGTAATCTTGTTTTGATTCAAAATCACTCCAAAACTGTTATCTGGCAGAGCTTTGATCATCACACTGATACCTTACTTCCGTATGCCAAATTGGGAGTCAACAAAAAAACTGGTCAGAACTGGTTCTTGCAGGCGTGGAAGACAGATGATGACCCTGGAACTGGAAGCTTCTCTGTTAGGTTCAATACTAGTGGGAAAGCTCAGATGTTTGCATACAAGAGGAATAACCCAGTGTGGCGAGCAGGATCCTACAATGGCGAAATATTTGTGGGTATCCCATTTATCAAACGGGCTACAGCCACTGATTATGGCATTAATGTCACTGACAATGATAATGAGGTTGGATTTCTATTTTACGCTTTTGACAAGAAAACCATCATAAGGGTGGTTGCTCTTCAGTCTGGATTCTTTCAAACATTGCTATGGGATTATGATAAGCAACAATGGAATCGATTTTGGTCTGCTCCAGAAGTAGATTGTGACAACTATGGATCATGCGGTACCAACAGCAACTGTGACCCTCTTAACTATGCAAATTTCAAGTGTTCTTGCCTACCTGGGTTTGAACCTGGAAATACAACAAATTGGTATCAACATGGCGATGCAACAGAGGGTTGTGTGAGGAAGAAAGGGCCATCCTTATGTGGGAATGGAGAGGGCTTTGTTAGAGTAGAAAGCGTTAAAATTCCTGACACATCTGTGGCAAATGCTAATATGGAGATGAGTTTGGAAGAATGTGAACAAGAGTGCTTGAGGAACTGTTCTTGTAATGCCTACGCAGCTGCTGATGTGAGAAATGGTGGAAGTGGATGCTTGACATGGTATGGTACTTTGATGGACACGCAGATCTTAAGTCAAGAAGGCCATGGTTTATTTGTTCGTGTTGATGCTGTTGAACTCGCAAAATATGCTAGGAAGTCAAAAAGAGCACTTGCCAAGTCGGCGATAGTGGGTATTGCAACAGCTTGTGTCACGTTGATTACTCTTATTGCCTTGTTTGTCTACTGCTTTTGGAACAGAAAAAGAAAAGATGAAATAGCCGAACAAGAATTAAAATTAAATTCCCCTACAGAAGAGGAGGATGGAGAAAATAGAGCACAACCAAGCTTACCATTTTTCAACATCAAAACCATGATGACTGCAACAAACAATTTCTCAGAAGAGAATCAATTAGGGCAAGGTGGATTTGGTTCTGTATACAAGGGCATATTAGTTAATGGACAAGAGATAGCAGTCAAAAGATTGTCTCAAGGTTCTGGACAAGGCACGCAAGAGTTCAAGAATGAAATTAGACTAATTGCAAAACTACAACACAGGAATCTTGTGAAACTGCTTGGTTATTGCATTCATAAGGAAGAAAGGATGTTGATCTATGAGTACTTGCCCAACAAAAGCTTGAACTTTTTCCTCTTTGATAGGAATCAAGGAACGATATTAAATTGGGACACACGTTTTCATATTATATTTGGAATTGCTCGAGGTTTGCTTTATCTTCATCAAGATTCAAGGTTAAAAATAATCCATAGAGACCTTAAAGCTAGCAATGTCCTTCTAGATGTTACAATGAATCCAAAAATTTCTGATTTTGGTATGGCTAGAATATTTGAAGAGGATCAAATTCAAGCAAGAACTAGACGAATCGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGGTAGGGCAATATTCAACAAAGTCCGATGTTTTCAGTTTCGGTATTCTATTGTTAGAGATTATTAGTGGAAAGAGAAATACATATTGTCTCAAAGAACAAGCATCCGCAAATTTGATTGGACAGGTTTGGGACTTGTGGAGAGAAGGAAAAGCCTTGGAAATAATGGATTCAACACTTGGTGAATCTTATCCTCTTGATGTAGCCCTAAGGTGTATACAAATTGGGCTATTGTGTGTGCAAGAAAGTGCCTTCTATAGGCCATCCGTGTTGGAAGTCATTTTCATGCTTGGCAATGAAGTAACCCTTCCTTCACCTCGAAAACCTGCTTTCTTGTTCAATTCTAACGTAGAGCATTCAGAATCTTCAACATCTGGAGATCCTTCAATAAACAATGTCACAACTACTACAATCAGTGCTCGATGA 2493 0.3951 MKIANGMVIFSVIIHHCVLFCAASDIITSDNPVSDGELLISKENKFALGFFTPGKSNYRYIGIWYYNLPEKTVVWVANRDDPLHDTSGVLSINSNGNLILHHNYSDFPIWSANVSITVPHATIMAQLTDLGNLVLIQNHSKTVIWQSFDHHTDTLLPYAKLGVNKKTGQNWFLQAWKTDDDPGTGSFSVRFNTSGKAQMFAYKRNNPVWRAGSYNGEIFVGIPFIKRATATDYGINVTDNDNEVGFLFYAFDKKTIIRVVALQSGFFQTLLWDYDKQQWNRFWSAPEVDCDNYGSCGTNSNCDPLNYANFKCSCLPGFEPGNTTNWYQHGDATEGCVRKKGPSLCGNGEGFVRVESVKIPDTSVANANMEMSLEECEQECLRNCSCNAYAAADVRNGGSGCLTWYGTLMDTQILSQEGHGLFVRVDAVELAKYARKSKRALAKSAIVGIATACVTLITLIALFVYCFWNRKRKDEIAEQELKLNSPTEEEDGENRAQPSLPFFNIKTMMTATNNFSEENQLGQGGFGSVYKGILVNGQEIAVKRLSQGSGQGTQEFKNEIRLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLNFFLFDRNQGTILNWDTRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDVTMNPKISDFGMARIFEEDQIQARTRRIVGTYGYMSPEYAMVGQYSTKSDVFSFGILLLEIISGKRNTYCLKEQASANLIGQVWDLWREGKALEIMDSTLGESYPLDVALRCIQIGLLCVQESAFYRPSVLEVIFMLGNEVTLPSPRKPAFLFNSNVEHSESSTSGDPSINNVTTTTISAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00012 830 Pfam Protein tyrosine and serine/threonine kinase 518 723 IPR001245 GO:0004672|GO:0006468
Pral330g00012 830 SMART blect_4 30 151 IPR001480 -
Pral330g00012 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 778 - -
Pral330g00012 830 Gene3D - 19 149 IPR036426 -
Pral330g00012 830 Gene3D Transferase(Phosphotransferase) domain 1 591 792 - -
Pral330g00012 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 480 590 - -
Pral330g00012 830 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pral330g00012 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Pral330g00012 830 Pfam PAN-like domain 345 411 IPR003609 -
Pral330g00012 830 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Pral330g00012 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pral330g00012 830 SMART ntp_6 346 425 IPR003609 -
Pral330g00012 830 CDD PAN_AP_plant 342 425 - -
Pral330g00012 830 CDD B_lectin 30 150 IPR001480 -
Pral330g00012 830 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Pral330g00012 830 SUPERFAMILY Protein kinase-like (PK-like) 499 805 IPR011009 -
Pral330g00012 830 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00012 830 MobiDBLite consensus disorder prediction 808 830 - -
Pral330g00012 830 Gene3D Hepatocyte Growth Factor 344 421 - -
Pral330g00012 830 CDD STKc_IRAK 521 786 - -
Pral330g00012 830 SMART serkin_6 515 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00012 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pral330g00012 830 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Pral330g00012 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Pral330g00012 830 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Pral330g00012 830 Gene3D Phosphorylase Kinase; domain 1 477 590 - -
Pral330g00012 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00012 Pral-Chr330 128492 133148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00012 446 827 Receptor kinase-like Gene Family AT4G05200 48.825 5.48e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00012 PK_Tyr_Ser-Thr 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00012 - - pcin:129286378 1365.13