Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00011 ATGGAAGTTCTGAGAACGAAGATAGCTATGAGGCTGATTTTCATATATATAATCTTATTCTTCAATTACTGCTTCTTGTTTTGTGCAGCTTCTTCTTCTGACGCCATAACCATTGGCAAACCCATTAGCGATAATGGAGAGCTTCTCATTTCTAAAGGAGGAAAATTTGCTCTTGGCTTCTTCTCTCCAGGCAAATCTACCTTTCGCTTTGTTGGAATCTGGTACTATAACTTGCCAAAGCAAACTTTTGTTTGGGTTGCCAATAGAGATAAACCCATAAATGACTCTTCTGGAGTTCTCTTCCTCAACCCAAACAATGGAAATCTCGTCCTCCGCCAGAACTCCACCAACTTGCCCATTTGGTCCTCGAACGTTTCTGTCCCTGTTCCAAGTAATACAGTTATGGCTCAGCTCACTGATTTAGGTAATCTCGTTCTGATTCAAAATAATGACTCCAAAAATGCGTTGTGGCAAAGCTTTGATCATCTCACTGACACCCTTCTTCCATATGCCAAACTGGGTTTCAACAAAAGAACTGGTCAGAACTGGTTGTTGCAGTCATGGAAGACACAAGATGATCCAGGAACAGGAAGTATCTCGCTGAGGTTCAACACATCTGGGAAAGATCAAGTTTTTCTATATAATAAAAAAGTTCCATTGTGGCGAGGTGGGTTCTTCAATGGCGAAATACTTGTGGGTTTGCCATCTATGAGAAGAGAAATGTCATATGCTTTCAACCTTACTATCACAGACGATGATAATTCTGCCGGATTCACATATCACGCCGTCGATCCCACCGCCATCTTCCGGATCTCAGTTGTTCCGACGGGATACATGCAAACACATAAATGGGATCATGATATAAATGATTGGAAGCTATATGGATCATACCCAGAAATCAATTGTGAAACCTATGGAACTTGTGGAGCCAATAGCAAGTGTGATTCTTTCAACTATGCTTACAACAAGTGTTTTTGCCTACCGGGGTTTGAACCTAGTAACCCTAATGAGTGGTACATGAACGATGAATCAGCTGGTTGTGTGAGGAAGAAAGGACCATCTTTGTGTGGGAATAATGGAGAAGGCTTCATTAAAGTAGACGGTGTGAAGATTCCAGATACTTCCATAGCCAATTTTCAGAAAGGTTTGAGAGTGGAGGATTGTGAACAAGAGTGCTTGAGAAATTGTTCTTGTAATGGCTATGCGGCTTCAGATGTGAGAAATGGAGGAAGTGGGTGCTTGACTTGGCATGGAGATTTGCTGGACACCATGGTACTAAGTGAAGAAGGCCATGATTTATATGTTCGTGTTGATGCTGTTGAACTTGCAAATTATGCCAAGAAATCAAAAGGACCGCTTCCAAAGTCTGGGATGGTGGGAATTCCAGTAGCTACTTTCGCCGTGATTGTTCTTCTAATTGCCATGTGTGCTTATTGCTTTCGGATAAGGAAAATAAGAGGTGGTGAAATAACTGAAGAACAAATGAAAATAGATTCTCCAATAGAAGAGCAGTACCATGATGAAAATAGAGCACAACCAAGCTTACCATGTTTCAGCATTAAAACCATAATGGTTGCAACAAATAAATTGTCCAATGAGAACCGATTGGGGCGAGGTGGATTTGGTTCTGTGTACAAGGGCTTATTATTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTCAAAGTTCTAGACAAGGAACTCAAGAGTTCAAGAATGAAATTAAGGTGATTGGAAGATTACAACACAGGAATCTTGTAAAGTTGCTTGGTTATTGCATTCATAAGAAAGAAAGGATGCTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTCTTTGATAGGGATAGAAGATCATCACTAGATTGGGATACACGTTTTCACATCATCATTGGAATTGCTCGAGGCATCCTCTATCTTCATCAAGATTCAAGGTTGAAAATAATCCATAGAGATCTTAAAGCTAGCAATGTCCTTTTAGACCTCGCAATGAATCCCAAAATTTCAGATTTTGGAATGGCTAGAATATTTGGAGAGGATCAAATCCAAGCAAATACAAAACGAATTGTTGGGACATAG 2088 0.4009 MEVLRTKIAMRLIFIYIILFFNYCFLFCAASSSDAITIGKPISDNGELLISKGGKFALGFFSPGKSTFRFVGIWYYNLPKQTFVWVANRDKPINDSSGVLFLNPNNGNLVLRQNSTNLPIWSSNVSVPVPSNTVMAQLTDLGNLVLIQNNDSKNALWQSFDHLTDTLLPYAKLGFNKRTGQNWLLQSWKTQDDPGTGSISLRFNTSGKDQVFLYNKKVPLWRGGFFNGEILVGLPSMRREMSYAFNLTITDDDNSAGFTYHAVDPTAIFRISVVPTGYMQTHKWDHDINDWKLYGSYPEINCETYGTCGANSKCDSFNYAYNKCFCLPGFEPSNPNEWYMNDESAGCVRKKGPSLCGNNGEGFIKVDGVKIPDTSIANFQKGLRVEDCEQECLRNCSCNGYAASDVRNGGSGCLTWHGDLLDTMVLSEEGHDLYVRVDAVELANYAKKSKGPLPKSGMVGIPVATFAVIVLLIAMCAYCFRIRKIRGGEITEEQMKIDSPIEEQYHDENRAQPSLPCFSIKTIMVATNKLSNENRLGRGGFGSVYKGLLFNGQEIAVKRLSQSSRQGTQEFKNEIKVIGRLQHRNLVKLLGYCIHKKERMLIYEYLPNKSLDFFLFDRDRRSSLDWDTRFHIIIGIARGILYLHQDSRLKIIHRDLKASNVLLDLAMNPKISDFGMARIFGEDQIQANTKRIVGT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00011 695 Pfam D-mannose binding lectin 82 189 IPR001480 -
Pral330g00011 695 SMART blect_4 39 163 IPR001480 -
Pral330g00011 695 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Pral330g00011 695 Pfam S-locus glycoprotein domain 221 333 IPR000858 GO:0048544
Pral330g00011 695 Pfam PAN-like domain 356 423 IPR003609 -
Pral330g00011 695 Pfam Protein tyrosine and serine/threonine kinase 532 684 IPR001245 GO:0004672|GO:0006468
Pral330g00011 695 CDD B_lectin 45 162 IPR001480 -
Pral330g00011 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Pral330g00011 695 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 194 IPR036426 -
Pral330g00011 695 SUPERFAMILY Protein kinase-like (PK-like) 511 695 IPR011009 -
Pral330g00011 695 SMART ntp_6 358 437 IPR003609 -
Pral330g00011 695 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 685 - -
Pral330g00011 695 Gene3D Transferase(Phosphotransferase) domain 1 606 695 - -
Pral330g00011 695 SMART serkin_6 530 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00011 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 605 - -
Pral330g00011 695 ProSiteProfiles Protein kinase domain profile. 530 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00011 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 160 - -
Pral330g00011 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 606 695 - -
Pral330g00011 695 CDD PAN_AP_plant 353 437 - -
Pral330g00011 695 Gene3D Phosphorylase Kinase; domain 1 492 605 - -
Pral330g00011 695 ProSiteProfiles PAN/Apple domain profile. 356 438 IPR003609 -
Pral330g00011 695 Gene3D - 28 161 IPR036426 -
Pral330g00011 695 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00011 Pral-Chr330 112941 116487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00011 446 695 Receptor kinase-like Gene Family AT4G05200 54.400 4.12e-80 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00011 PK_Tyr_Ser-Thr 7.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00011 - - pcin:129286378 990.334