Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00008 ATGAGGCTGATTTTCATATGTATAATCTTATTCTTCAATTACTGCTTCTTGTTTTGTGCAGCTTTTTCTTCTGACGCCATAACCATTGGCAAACCCTTTAGCGATAATGGAGAGCTTGTCATTTCTAAAGGAAGAAAATTTGCTCTTGGCTTCTTCTCTCCAGGCAAATCTGCCTTTCGCTTTGTTGGAATCTGGTACTATAACTTGCCAAAGCAAACTGTTGTTTGGGTTGCCAATAGAGATAATCCCATAAATGACTCTTCTGGAGTTCTCTTCCTCAACCCAAATAATGGAAATCTCGTCCTCCGCCAGAACTCTACCAACTTGCCCATTTGGTCCTCGAATGTTTCTGTCCCTGTTCCAAGTAATACAGTTATGGCTCAGCTCACTGATTTAGGTAATCTCGTTCTGATTCAAAATAATGACTCCAAAAATGTGTTGTGGCAAAGCTTTGATCATCTCACTGACACCCTTCTTCCATATGCCAAACTGGGTTTCAACAAAAGAACTGGTCAGAACTGGTTGTTGCAGTCATGGAAGACAGAAGATGATCCAGGAACAGGAAATATCTCATTCAGGTCCAACACATCTGGGAAAGATCAAGTTTTTCTGTACCATAAAAAAGTTCCATTGTGGCGAGGTGGGTTCTTCAATGGCGAAATATTTGTGGGTTTGCCATCTATGAAAAGAGAACTGTCATATGCTTTAAACCTTACTATCACAGACGATGATAATTCTGCCGGACTCACATATCACGCCGTTGATCCTACCGCCATCTTTCGGGTCGGAGTTGTTTCAACGGGCTACATGCAAACACATAAATGGGATCATGACACAAATGATTGGAAGCTATATGGGACACACCCAGCAAGCAATTGTGAAACCTACGGAACTTGTGGAGCCAACAGCAAGTGTGATTCTTTCAACTATGCTTACAACAAGTGTTTTTGCCTACCTGGGTTTGAACCTAGTAACCCTAATGAGTGGTACATGAACGATGAATCAGCTGGTTGTGTGAGGAAGAAAGGACCATCTTTGTGTGGGAATAATGGAGAAGGCTTCATTAAAGTAGATGGTGTGAAGATTCCAGATACTTCGATAGCCAATTTTCAGCAGGGTTTGAGAATGGAGGATTGTGAGCAAGAGTGCTTGAGAAATTGTACTTGTAATGGCTATGCAGCTTCAGATGTGAGAAATGGCGGAAGTGGGTGCTTGACTTGGCATGGAGATTTGCTGGACACAACGGTATTAAGTGAAGAAGGCCATGATTTATATGTTCGTGTTGATGCTGTTGAACTTGGTGGTGAAATAACTGAAGAACAAATGAAAATAGATTCTCCAATAGAAGAGCAGTACCATGATGAAAATAGAGCACAACCAAGCTTACCATGTTTCAGCATTAAAACCATAATGGTTGCAACAAATAAATTCTCCAATGAGAACCGATTGGGGCAAGGTGGATTTGGTTCTGTGTACAAGGGCTCATTATTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTCAAGGTTCCAGACAAGGAACTCAAGAGTTCAAGAATGAAATTAAGGTGATAGGAAGATTGCAACACAGGAATCTTGTAAAGTTGCTTGGTTATTGCATTCATAAGAAAGAAAGGATGCTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTCTTTGATAGGGATAGAAGATCATCACTAGATTGGGATACACGTTTTCACATCATCATTGGAATTGCTCGAGGCATTCTCTATCTTCATCAAGATTCGAGGTTGAAAATAATCCATAGAGATCTTAAAGCTAGCAATGTCCTTTTGGACCTCGCAATGAATCCCAAAATTTCAGATTTTGGAATGGCTAGAATATTTGGAGAGGATCAAATCCAAGCAAATACAAAACGAATTGTTGGGACATATGGCTATATGTCTCCAGAATATGCAATGGAAGGACAATATTCAACAAAATCTGATGTTTTCAGTTTTGGGATTCTGTTGATAGAGATTATTTGTGGAAAAAGAAACACAGATCACGATAAAGAAAGATCATCTGTAAATTTAATTGGACATGTGTGGGAGATGTGGAGAGAAGAAAAATCCTTGGACATGGTGGATCCAATACTTGGTGAAGCATATCCAATTGACTTAGCCCGAAGATGTATACATATTGGGCTGTTGTGTGTGCAAGAAAATGCCTCCTATAGGCCTTCCATGTCAGAAGTAATCTACATGCTTGGCAATGAAGTGTCCCTCCCCTCACCTCGAAGACCTGCATTCCTATTCAATTCGAATGCAGAGCTTTCAGAATCTTCAACATCTAAAGATCCTTCTGTAAACGAAATTACTGGTACAACAATCAGTGCTAGATAA 2379 0.3997 MRLIFICIILFFNYCFLFCAAFSSDAITIGKPFSDNGELVISKGRKFALGFFSPGKSAFRFVGIWYYNLPKQTVVWVANRDNPINDSSGVLFLNPNNGNLVLRQNSTNLPIWSSNVSVPVPSNTVMAQLTDLGNLVLIQNNDSKNVLWQSFDHLTDTLLPYAKLGFNKRTGQNWLLQSWKTEDDPGTGNISFRSNTSGKDQVFLYHKKVPLWRGGFFNGEIFVGLPSMKRELSYALNLTITDDDNSAGLTYHAVDPTAIFRVGVVSTGYMQTHKWDHDTNDWKLYGTHPASNCETYGTCGANSKCDSFNYAYNKCFCLPGFEPSNPNEWYMNDESAGCVRKKGPSLCGNNGEGFIKVDGVKIPDTSIANFQQGLRMEDCEQECLRNCTCNGYAASDVRNGGSGCLTWHGDLLDTTVLSEEGHDLYVRVDAVELGGEITEEQMKIDSPIEEQYHDENRAQPSLPCFSIKTIMVATNKFSNENRLGQGGFGSVYKGSLFNGQEIAVKRLSQGSRQGTQEFKNEIKVIGRLQHRNLVKLLGYCIHKKERMLIYEYLPNKSLDFFLFDRDRRSSLDWDTRFHIIIGIARGILYLHQDSRLKIIHRDLKASNVLLDLAMNPKISDFGMARIFGEDQIQANTKRIVGTYGYMSPEYAMEGQYSTKSDVFSFGILLIEIICGKRNTDHDKERSSVNLIGHVWEMWREEKSLDMVDPILGEAYPIDLARRCIHIGLLCVQENASYRPSMSEVIYMLGNEVSLPSPRRPAFLFNSNAELSESSTSKDPSVNEITGTTISAR 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00008 792 PIRSF SRK 1 448 IPR024171 GO:0004674
Pral330g00008 792 PIRSF SRK 435 792 IPR024171 GO:0004674
Pral330g00008 792 Pfam Protein tyrosine and serine/threonine kinase 480 745 IPR001245 GO:0004672|GO:0006468
Pral330g00008 792 SMART ntp_6 349 428 IPR003609 -
Pral330g00008 792 SMART serkin_6 477 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00008 792 Pfam S-locus glycoprotein domain 212 324 IPR000858 GO:0048544
Pral330g00008 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Pral330g00008 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 441 552 - -
Pral330g00008 792 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Pral330g00008 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 151 - -
Pral330g00008 792 Gene3D Phosphorylase Kinase; domain 1 439 552 - -
Pral330g00008 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Pral330g00008 792 SMART blect_4 30 154 IPR001480 -
Pral330g00008 792 CDD STKc_IRAK 483 748 - -
Pral330g00008 792 MobiDBLite consensus disorder prediction 771 792 - -
Pral330g00008 792 ProSiteProfiles Protein kinase domain profile. 477 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00008 792 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 740 - -
Pral330g00008 792 Pfam PAN-like domain 347 414 IPR003609 -
Pral330g00008 792 Pfam Domain of unknown function (DUF3403) 750 792 IPR021820 GO:0004674
Pral330g00008 792 FunFam Liguleless narrow1 553 755 - -
Pral330g00008 792 SUPERFAMILY Protein kinase-like (PK-like) 461 764 IPR011009 -
Pral330g00008 792 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Pral330g00008 792 Pfam D-mannose binding lectin 73 180 IPR001480 -
Pral330g00008 792 Gene3D - 20 152 IPR036426 -
Pral330g00008 792 CDD PAN_AP_plant 344 428 - -
Pral330g00008 792 CDD B_lectin 32 153 IPR001480 -
Pral330g00008 792 Gene3D Transferase(Phosphotransferase) domain 1 553 754 - -
Pral330g00008 792 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00008 Pral-Chr330 89052 93655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00008 465 779 Receptor kinase-like Gene Family AT4G05200 58.228 1.45e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00008 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00008 - - pcin:129286378 1142.1