Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral330g00007 ATGAAGATAGCAAATGGATGGGTTATTTTATTTGTTATGTTCCATCACAGCTTCTTGTTTTGTGCAGCTTCTGATGCCATAACCATTAACAAACCCATCAGAGACGGTGAGCATCTAATTTCTAGCGAAAATTCATTTGCTCTAGGGTTCTTCACTCCAGGCAAATCAAACAATCGCTATGTAGGAATTTGGTACAACAATCTGCCAGAACCAACTGTGGTTTGGGTTGCAAACAGAGACGATCCCATTAATGATACCTCTGGTGTTCTCTCCATCAGCTCAGATGGAAACCTAGTTCTTCATCGTAACTACTCCGACATTCCCATCTGGTCTACGAATGTTTCTGTCCCTGTTCCAAACACAACAGTTATGGCTCAACTCACAGATATAGGTAACTTTGTTTTGACTTCTCAAAATGACTCCAAAACTGTTTTATGGCAAAGCTTTGATCATCTTTCCGATACTTTGCTTCCGTATGGGAAATTGGGAGTGAACAGAAGGACTGGCCAGAGCTGGTTTTTGCAGTCCTGGAAGGCAGAGGAAGATCCAGGAACAGGAAACTTCACCATGAAGTTTAATGTTAATGGGAAACCTCAGTTATTCTTGTACAATAATTACGCACCATGGTGGCGGGCTGGATCCTACAACGGCGAAATGCTTGTGGGTATTCCATTTATGAAACGAGCAATGTCAACTTATGTTACTATTCCTTTCTCGGATGATGGTAATGAAGTTAAAATTTTATTTCACCCCTATGACAAGAAAATCATCATGCGAGTGGTGGCTGTTCAATCTGGATTCTTCCAAGCCTTGCTATGGGATAATGATAAGAAACAATGGAATCGATATTGGTCTGGTCCAGAAGTGGATTGTGATAACTATGGATCTTGTGGTGCCAATGGGAATTGTGATCCTCTTAACTACGCAAATTTCAGGTGTTCTTGCTTACCTGGGTTTGAACCCAAAAACCCAACAAATTGGTATCAACAGGGCGATCCATCAGAAGGTTGTGTGAGAACGAAAGGACCATCCTTATGTGGGAATGGAGAAGGATTTGTTAAAGTAGAAAGCGTAAAGATTCCTGATACGTCCGTGGCAAATTCAAATATGACTATGAGTTTGGAAGAATGTGAAAAAGAATGCTTGAGAAACTGTTCTTGTAATGCCTATTCTGTTTCTGATGTGAGAAATGGTGGGACTGGATGCTTGATTTGGCATGGGATTTTGATGGATACACAAAAATTAAGTCAGGAAGGGCAGGATATATATGTTCGTGTTGATGCTATTGAACTTGAAACATATGCTAGGAAATCAAAAAGATCAGCGCTTGCTATGTCTTGGAAAGTGGGGATTACAGTGACTTGTGTGATTTTGCTGATTGCTCTTCTTATTGTCTTATCTGTGTGTTTCATTCGGATCAAAAAACGAAGAGATGAGATAATCGAACAAGAAGCAAAATTAAATTCCCCAACAGAGGAGCAAAACGGTGAAAACAGAGCACAATCGAGCTTACCATTTTTCAGCGTCAAAACCATAACAACGGCAACAAACAATTTCTCAGATGAGAATCAATTAGGGCAAGGAGGATTTGGTTCTGTTTACAAGGGAACATTAATTAATGGAGAAGAGATAGCAGTGAAGAGATTGTCCCAAGATTCTGGACAAGGCACTCAAGAGTTCAAGAATGAAATTAAACTAATTGCCAAATTGCAACACAGGAACCTTGTGAAATTGCTTGGATATTGCATTCACAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAAGCTTGAACTTCTTTCTCTTTGATAGGAGTCAAAGAATGCCATTAGATTGGGATACACGTTTCAATATTATATTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCAAGATTCAAGGCTAAAAATAATTCATAGAGACCTTAAAGCTAGCAATGTCCTCTTGGATGCTACAATGAATCCTAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGAGAGAACCAGATCCAAGCAAGAACTAGACGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGGTAGGACAATATTCAACAAAGTCTGATGTTTTTAGCTTTGGTGTTCTATTGTTAGAGATTATTAGTGGCAAGAGAAATACAGACTCTGATAAAGAAAGAGCATCCCCAAATTTGATTGGACAGGTATGGGACCTTTGGAGAGAAGAAAAAGCCTTGGAAATAGTGGACTCAACACTTGGTGAATCATATCCTCTTGACATAGCCTTAAGGTGTATACAAATTGGGCTATTATGTGTGCAAGAAAGTGCCCTCTATAGGCCATCCATGTTGGAAGTTGTTTTCATGCTTGGTAATGAAGTAACCATTCCCTCACCTCATAAGCCAGCATTCCTATTCAATTCTAACATAGAGAATTCAGAATCTTCAGCATCTGGAGATCCTTCAGTAAACACTATTTCAGATACTACAATTAGTGCTCGATAA 2505 0.3912 MKIANGWVILFVMFHHSFLFCAASDAITINKPIRDGEHLISSENSFALGFFTPGKSNNRYVGIWYNNLPEPTVVWVANRDDPINDTSGVLSISSDGNLVLHRNYSDIPIWSTNVSVPVPNTTVMAQLTDIGNFVLTSQNDSKTVLWQSFDHLSDTLLPYGKLGVNRRTGQSWFLQSWKAEEDPGTGNFTMKFNVNGKPQLFLYNNYAPWWRAGSYNGEMLVGIPFMKRAMSTYVTIPFSDDGNEVKILFHPYDKKIIMRVVAVQSGFFQALLWDNDKKQWNRYWSGPEVDCDNYGSCGANGNCDPLNYANFRCSCLPGFEPKNPTNWYQQGDPSEGCVRTKGPSLCGNGEGFVKVESVKIPDTSVANSNMTMSLEECEKECLRNCSCNAYSVSDVRNGGTGCLIWHGILMDTQKLSQEGQDIYVRVDAIELETYARKSKRSALAMSWKVGITVTCVILLIALLIVLSVCFIRIKKRRDEIIEQEAKLNSPTEEQNGENRAQSSLPFFSVKTITTATNNFSDENQLGQGGFGSVYKGTLINGEEIAVKRLSQDSGQGTQEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLNFFLFDRSQRMPLDWDTRFNIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGENQIQARTRRIVGTYGYMSPEYAMVGQYSTKSDVFSFGVLLLEIISGKRNTDSDKERASPNLIGQVWDLWREEKALEIVDSTLGESYPLDIALRCIQIGLLCVQESALYRPSMLEVVFMLGNEVTIPSPHKPAFLFNSNIENSESSASGDPSVNTISDTTISAR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral330g00007 834 Gene3D Hepatocyte Growth Factor 345 425 - -
Pral330g00007 834 CDD STKc_IRAK 525 790 - -
Pral330g00007 834 SMART ntp_6 347 426 IPR003609 -
Pral330g00007 834 Gene3D Transferase(Phosphotransferase) domain 1 595 797 - -
Pral330g00007 834 CDD PAN_AP_plant 343 426 - -
Pral330g00007 834 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Pral330g00007 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pral330g00007 834 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
Pral330g00007 834 CDD B_lectin 30 151 IPR001480 -
Pral330g00007 834 PIRSF SRK 1 834 IPR024171 GO:0004674
Pral330g00007 834 CDD EGF_CA 290 323 - -
Pral330g00007 834 SMART serkin_6 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00007 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Pral330g00007 834 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Pral330g00007 834 MobiDBLite consensus disorder prediction 813 834 - -
Pral330g00007 834 SMART blect_4 30 152 IPR001480 -
Pral330g00007 834 Gene3D - 19 150 IPR036426 -
Pral330g00007 834 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Pral330g00007 834 Pfam PAN-like domain 346 412 IPR003609 -
Pral330g00007 834 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral330g00007 834 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 782 - -
Pral330g00007 834 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Pral330g00007 834 SUPERFAMILY Protein kinase-like (PK-like) 502 805 IPR011009 -
Pral330g00007 834 Pfam Protein tyrosine and serine/threonine kinase 522 787 IPR001245 GO:0004672|GO:0006468
Pral330g00007 834 ProSiteProfiles PAN/Apple domain profile. 346 428 IPR003609 -
Pral330g00007 834 Pfam D-mannose binding lectin 72 178 IPR001480 -
Pral330g00007 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Pral330g00007 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 484 594 - -
Pral330g00007 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral330g00007 Pral-Chr330 46388 50949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral330g00007 449 822 Receptor kinase-like Gene Family AT4G05200 51.200 1.86e-127 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral330g00007 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral330g00007 - - pcin:129286378 1337.4