Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3308g00009 ATGATTTCCGTTGAATCCCAGCAAAACCCAGACCTCACTTCTCCTCCTTCCCCAAAACTTGCTTCAAATGATGCAAAATCTGCAGATTCTTCTCAGACTACCCATATCTTCAAGTCTAAATTACCAGCCATAACTATTTCGAACCATCTTCCGCTTCACGCTTACTGCTTCGAGAATCTCTCGCAATTCGCTGACCGTCCCTGCCTCATCATCGGCTCCACCGGGAAAATTTACTCCTATGCGGATGCTCACCTGCAGTCGCGGAAGGTCGCCGCCGGATTCTCCAAGCTCGGGATCAAGAAAGGTGATGTGATTATGATACTGCTTCAGAATTCTGCTGAATTTGTTCTGTCGTTCTTCGCTGCTTCAATGATCGGCGCTGTGGCCACTACGGCGAATCCGTTCTACACTGCTGACGAGATCTTCAAGCAGTTCCGCGCCGCGAAGGCAAAACTGATCATCACGCAATCCGCGTACGTCGGCAAGCTCCGAGACCACGAGGCCGGTGCGGACATCGGAGCGGATCAGCTTAAGGTGATCACCATCGATGATCCGCCAGAGAAGTGCTTGCATTTCTCGGTGGTGTCGGAAGCCGACGAGAGCGAGATGCCAGAGGTGGAGATCGACCCGGACGATCCGGTGGCCTTGCCGTTTTCTTCCGGAACGACAGGATTGCCTAAGGGCGTGATTCTGACACACAAGAGCTTAACGACGAGCGTGGCGCAACAGGTCGACGGCGAGAATCCGAACCTGTACCTGAAAGCAGAGGACGTGTTGCTATGCGTGCTTCCTCTGTTTCACATATTCTCTCTGAACAGTGTGTTGTTGTGCGCTCTGAGAACGGGAAGTGCGGTATTGCTGATGCACAAGTTTGAGATTGGGGCGTTGCTCGAACTGACCCAGAGGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGTTAGCGAAGAATCCGATGGTGGCCGACTTCGACCTGAGCTCAATACGGTTGGTGTTGTCCGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTAAGAAGCAGAGTACCTCAGGCCGTTTTGGGTCAGGGGTACGGAATGACGGAGGCAGGGCCGGTGTTGTCCATGTGTCTGGGCTTCGCAAAAGAACCCTTTCCAACAAAGTCAGGGTCATGTGGCACCGTCGTCAGAAACGCAGATCTGAAAGTCGTTGACCCTGAAACTGGGCGCTCTCTGGCTTATGGCCAACCCGGTGAGATTTGCATCCGAGGCCAGCAAATCATGAAAGGATATCTGAATGATGAGAAGGCGACAGCAGCAACAATAGATGCAGAGGGATGGCTTCACACAGGGGATATTGGGTACGTAGATGACGACGATGAGTTATTCATAGTGGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGGCACCAGCTGAACTTGAAGGCCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGGATGATGTTGCTGGTGAACTTCCTGTTGCGTTTGTGGTAAGGTCAAATGGCTATGATCTTACTGAAGAGGCCGTAAAGGAGTACATATCCAAACGGGTAGTGTTTTACAAGAGATTACACAAAGTGTATTTCGTTCATGCAATTCCAAAGTCTCCATCTGGGAAGATATTGAGAAAAGACCTGAGAGCAAAGCTAGAGAGCAACAACATCCAAACGCCTTGA 1725 0.5194 MISVESQQNPDLTSPPSPKLASNDAKSADSSQTTHIFKSKLPAITISNHLPLHAYCFENLSQFADRPCLIIGSTGKIYSYADAHLQSRKVAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQFRAAKAKLIITQSAYVGKLRDHEAGADIGADQLKVITIDDPPEKCLHFSVVSEADESEMPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKAEDVLLCVLPLFHIFSLNSVLLCALRTGSAVLLMHKFEIGALLELTQRHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPFPTKSGSCGTVVRNADLKVVDPETGRSLAYGQPGEICIRGQQIMKGYLNDEKATAATIDAEGWLHTGDIGYVDDDDELFIVDRVKELIKFKGFQVAPAELEGLLVSHPSIADAAVVPQKDDVAGELPVAFVVRSNGYDLTEEAVKEYISKRVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLESNNIQTP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3308g00009 574 Pfam AMP-binding enzyme 58 472 IPR000873 -
Pral3308g00009 574 MobiDBLite consensus disorder prediction 1 26 - -
Pral3308g00009 574 Gene3D - 27 466 IPR042099 -
Pral3308g00009 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 564 - -
Pral3308g00009 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Pral3308g00009 574 SUPERFAMILY Acetyl-CoA synthetase-like 44 568 - -
Pral3308g00009 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 467 - -
Pral3308g00009 574 FunFam 4-coumarate--CoA ligase 2 468 569 - -
Pral3308g00009 574 CDD 4CL 46 562 - -
Pral3308g00009 574 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pral3308g00009 574 Gene3D - 467 571 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3308g00009 Pral-Chr3308 572025 578915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3308g00009 8 479 Monolignol Biosynthesis Gene Families AT1G65060 68.632 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3308g00009 K01904 - gmx:547492 908.672