Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3308g00008 ATGATTTCCGTTGAATCCCAGCAAAACCCAGACCTCACTTCTCCTCCTTCCCCAAAACTTGCTTCAAATGATGCAAAATCTGCAGATTCTTCTCAGACTACCCATATCTTCAAGTCTAAATTACCAGCCATAACTATTTCGAACCATCTTCCGCTTCACGCTTACTGCTTCGAGAATCTCTCGCAATTCGCTGACCGTCCCTGCCTCATCATCGGCTCCACCGGGAAAATTTACTCCTATGCGGATGCTCACCTGCAGTCGCGGAAGGTCGCCGCCGGATTCTCCAAGCTCGGGATCAAGAAAGGTGATGTGATTATGATACTGCTTCAGAATTCTGCTGAATTTGTTCTGTCGTTCTTCGCTGCTTCAATGATCGGCGCTGTGGCCACTACGGCGAATCCGTTCTACACTGCTGACGAGATCTTCAAGCAGTTCCGCGCCGCGAAGGCAAAACTGATCATCACGCAATCCGCGTACGTCGGCAAGCTCCGAGACCACGAGGCCGGTGCGGACATCGGAGCGGATCAGCTTAAGGTGATCACCATCGATGATCCGCCAGAGAAGTGCTTGCATTTCTCGGTGGTGTCGGAAGCCGACGAGAGCGAGATGCCAGAGGTGGAGATCGACCCGGACGATCCGGTGGCCTTGCCGTTTTCTTCCGGAACGACAGGATTGCCTAAGGGCGTGATTCTGACACACAAGAGCTTAACGACGAGCGTGGCGCAACAGGTCGACGGCGAGAATCCGAACCTGTACCTGAAAGCAGAGGACGTGTTGCTATGCGTGCTTCCTCTGTTTCACATATTCTCTCTGAACAGTGTGTTGTTGTGCGCTCTGAGAACGGGAAGTGCGGTATTGCTGATGCACAAGTTTGAGATTGGGGCGTTGCTCGAACTGACCCAGAGGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGTTAGCGAAGAATCCGATGGTGGCCGACTTCGACCTGAGCTCAATACGGTTGGTGTTGTCCGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTAAGAAGCAGAGTACCTCAGGCCGTTTTGGGTCAGGGGTACGGAATGACGGAGGCAGGGCCGGTGTTGTCCATGTGTCTGGGCTTCGCAAAAGAACCCTTTCCAACAAAGTCAGGGTCATGTGGCACCGTCGTCAGAAACGCAGATCTGAAAGTCGTTGACCCTGAAACTGGGCGCTCTCTGGCTTATGGCCAACCCGGTGAGATTTGCATCCGAGGCCAGCAAATCATGAAAGGATATCTGAATGATGAGAAGGCGACAGCAGCAACAATAGATGCAGAGGGATGGCTTCACACAGGGGATATTGGGTACGTAGATGACGACGATGAGTTATTCATAGTGGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGGCACCAGCTGAACTTGAAGGCCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGGATGATGTTGCTGGTGAACTTCCTGTTGCGTTTGTGGTAAGGTCAAATGGCTATGATCTTACTGAAGAGGCCGTAAAGGAGTACATATCCAAACGGGTGTGA 1605 0.529 MISVESQQNPDLTSPPSPKLASNDAKSADSSQTTHIFKSKLPAITISNHLPLHAYCFENLSQFADRPCLIIGSTGKIYSYADAHLQSRKVAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQFRAAKAKLIITQSAYVGKLRDHEAGADIGADQLKVITIDDPPEKCLHFSVVSEADESEMPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKAEDVLLCVLPLFHIFSLNSVLLCALRTGSAVLLMHKFEIGALLELTQRHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPFPTKSGSCGTVVRNADLKVVDPETGRSLAYGQPGEICIRGQQIMKGYLNDEKATAATIDAEGWLHTGDIGYVDDDDELFIVDRVKELIKFKGFQVAPAELEGLLVSHPSIADAAVVPQKDDVAGELPVAFVVRSNGYDLTEEAVKEYISKRV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3308g00008 534 MobiDBLite consensus disorder prediction 1 26 - -
Pral3308g00008 534 Gene3D - 27 466 IPR042099 -
Pral3308g00008 534 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 534 - -
Pral3308g00008 534 SUPERFAMILY Acetyl-CoA synthetase-like 44 533 - -
Pral3308g00008 534 Pfam AMP-binding enzyme C-terminal domain 481 533 IPR025110 -
Pral3308g00008 534 CDD 4CL 46 534 - -
Pral3308g00008 534 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 467 - -
Pral3308g00008 534 Pfam AMP-binding enzyme 58 472 IPR000873 -
Pral3308g00008 534 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pral3308g00008 534 Gene3D - 467 534 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3308g00008 Pral-Chr3308 572025 579154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3308g00008 8 479 Monolignol Biosynthesis Gene Families AT1G65060 68.632 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3308g00008 K01904 - gmx:547492 838.18