Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3308g00007 ATGATTTCCGTTGAATCCCAGCAAAACCCAGACCTCACTTCTCCTCCTTCCCCAAAACTTGCTTCAAATGATGCAAAATCTGCAGATTCTTCTCAGACTACCCATATCTTCAAGTCTAAATTACCAGCCATAACTATTTCGAACCATCTTCCGCTTCACGCTTACTGCTTCGAGAATCTCTCGCAATTCGCTGACCGTCCCTGCCTCATCATCGGCTCCACCGGGAAAATTTACTCCTATGCGGATGCTCACCTGCAGTCGCGGAAGGTCGCCGCCGGATTCTCCAAGCTCGGGATCAAGAAAGGTGATGTGATTATGATACTGCTTCAGAATTCTGCTGAATTTGTTCTGTCGTTCTTCGCTGCTTCAATGATCGGCGCTGTGGCCACTACGGCGAATCCGTTCTACACTGCTGACGAGATCTTCAAGCAGTTCCGCGCCGCGAAGGCAAAACTGATCATCACGCAATCCGCGTACGTCGGCAAGCTCCGAGACCACGAGGCCGGTGCGGACATCGGAGCGGATCAGCTTAAGGTGATCACCATCGATGATCCGCCAGAGAAGTGCTTGCATTTCTCGGTGGTGTCGGAAGCCGACGAGAGCGAGATGCCAGAGGTGGAGATCGACCCGGACGATCCGGTGGCCTTGCCGTTTTCTTCCGGAACGACAGGATTGCCTAAGGGCGTGATTCTGACACACAAGAGCTTAACGACGAGCGTGGCGCAACAGGTCGACGGCGAGAATCCGAACCTGTACCTGAAAGCAGAGGACGTGTTGCTATGCGTGCTTCCTCTGTTTCACATATTCTCTCTGAACAGTGTGTTGTTGTGCGCTCTGAGAACGGGAAGTGCGGTATTGCTGATGCACAAGTTTGAGATTGGGGCGTTGCTCGAACTGACCCAGAGGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGTTAGCGAAGAATCCGATGGTGGCCGACTTCGACCTGAGCTCAATACGGTTGGTGTTGTCCGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTAAGAAGCAGAGTACCTCAGGCCGTTTTGGGTCAGGGGTACGGAATGACGGAGGCAGGGCCGGTGTTGTCCATGTGTCTGGGCTTCGCAAAAGAACCCTTTCCAACAAAGTCAGGGTCATGTGGCACCGTCGTCAGAAACGCAGATCTGAAAGTCGTTGACCCTGAAACTGGGCGCTCTCTGGCTTATGGCCAACCCGGTGAGATTTGCATCCGAGGCCAGCAAATCATGAAAGGATATCTGAATGATGAGAAGGCGACAGCAGCAACAATAGATGCAGAGGGATGGCTTCACACAGGGGATATTGGGTACGTAGATGACGACGATGAGTTATTCATAGTGGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGGCACCAGCTGAACTTGAAGGCCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGGATGATGTTGCTGGTGAACTTCCTGTTGCGTTTGTGGTAAGGTCAAATGGCTATGATCTTACTGAAGAGGCCGTAAAGGAGTACATATCCAAACGGAGGGAATTAGGTGTGATGTGTAATCCATGA 1629 0.5267 MISVESQQNPDLTSPPSPKLASNDAKSADSSQTTHIFKSKLPAITISNHLPLHAYCFENLSQFADRPCLIIGSTGKIYSYADAHLQSRKVAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQFRAAKAKLIITQSAYVGKLRDHEAGADIGADQLKVITIDDPPEKCLHFSVVSEADESEMPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKAEDVLLCVLPLFHIFSLNSVLLCALRTGSAVLLMHKFEIGALLELTQRHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPFPTKSGSCGTVVRNADLKVVDPETGRSLAYGQPGEICIRGQQIMKGYLNDEKATAATIDAEGWLHTGDIGYVDDDDELFIVDRVKELIKFKGFQVAPAELEGLLVSHPSIADAAVVPQKDDVAGELPVAFVVRSNGYDLTEEAVKEYISKRRELGVMCNP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3308g00007 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 532 - -
Pral3308g00007 542 MobiDBLite consensus disorder prediction 1 26 - -
Pral3308g00007 542 SUPERFAMILY Acetyl-CoA synthetase-like 44 533 - -
Pral3308g00007 542 Gene3D - 27 466 IPR042099 -
Pral3308g00007 542 CDD 4CL 46 533 - -
Pral3308g00007 542 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pral3308g00007 542 Pfam AMP-binding enzyme C-terminal domain 481 537 IPR025110 -
Pral3308g00007 542 Gene3D - 467 537 IPR045851 -
Pral3308g00007 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 467 - -
Pral3308g00007 542 Pfam AMP-binding enzyme 58 472 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3308g00007 Pral-Chr3308 572025 579154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3308g00007 8 479 Monolignol Biosynthesis Gene Families AT1G65060 68.632 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3308g00007 K01904 - gmx:547492 836.639