Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3308g00006 ATGAATCTGCTCTATAAAGATGCATGGGCCACTACGCTCCCTGCAACCAACCAACCAACCTTCTCAGCTTTATATCCATATTTCATTATGGCCTCTCAAGCCTTATCATTCACAGTTCGTCGTTGCCAGCCGGAGCTAATTGCTCCGGCGAAGGCGACGCCCCGTGAAGTGAAGCTTTTATCAGACATCGACGACCAAGAGGGTCTTCGGTTCCAAATTCCAGTGATTCAGTTCTATCGTTATAATGCTTCCATGAGAGGAAAAGATCCCGTTAAGGTGATCAGAAAAGGTTTGGCTGAGACTCTGGTGTTCTTCTATCCCTTCGCCGGCCGTCTGCTGGAAGGGCCAAACCGGAAACTTATGGTGGATTGCAATGGTGACGGCGTCCTTTTCATCGAAGCAGATGCTGATATCACTCTGGAGGCATTTGGTGATGCTCTTCAGCCTCCTTTCCCTTGCTTGGAAGAGCTTCTATATGATGTTCCTGGCACTTCACCCGTTCTTAATACTCCACTTCTTCTTATTCAGGTGACACGTCTGAAATGCGGTGGTTATATTTTCGCCTTACGCCTTAATCACACAATGAGTGATGCTGCTGGTCTCGTTCAATTCATGAGCGCGTTAGGTGAAGTAGCTCGTGGTGCGCATGAGCCATCAATTCCGCCCGTTTGGAACAGGGAGCTTCTAAATGCAAGAGAACCACCACGCGTGACATGCACCCATCGTGAATACGATGAAGTCCCTGATACAAAAGGAACCATCATCCCCTTAGATGACATGGTCCATCGTTCTTTCTTCTTTGGGCCCAACGAAGTTGCTTCGATTCGCACTCAAATTCCCTACCACCTTCGTCAATCTTCTGATTTTGAAATAATCACGGCGTTCTTATGGCGTTGCCGTACAATGGCTTTGCAACCTGATGATGATGAAGAAGTTCGCATAATATGTATTGTTAATGCTCGTGCCAAATTTAACCCTCCATTGCCGGCAGGTTATTATGGCAATGCCTTCGCCTTTCCGGTGGCCGTGACCACTGCTAGAAAACTATGTCAGAACCCACTCGGATATGCTTTAGAGTTGGTGAAGAAAGCCAAAGGTGATGTGACTAAGGAATATATGCACTCTTTGGCAGATTTAATGGTGATCAAGGGGCGACCTCATTTCACGGTGGTGAGGTCATACTTGGTTTCAGATGTGACACGAGCGGGATTTGGTGATGTGGATTTTGGGTGGGGGAAGGCGGTGTATGGCGGTCCGGCAAAAGGAGGAGTGGGAGCCATTCCTGGGGTGGCAAGCTTTTATATACCATTTAAGAATGCTCATGGACAAGAAGGTCTAGTGATACCAGTTTGTTTACCTGGGGAAGCCATGAAGAGATTTGTAAAGGAGTTAGATAGCTTGCTCAAGAATTACTCTCAAAATCCGAGGCTATTTGTCACTTCTTCCTTATAA 1452 0.469 MNLLYKDAWATTLPATNQPTFSALYPYFIMASQALSFTVRRCQPELIAPAKATPREVKLLSDIDDQEGLRFQIPVIQFYRYNASMRGKDPVKVIRKGLAETLVFFYPFAGRLLEGPNRKLMVDCNGDGVLFIEADADITLEAFGDALQPPFPCLEELLYDVPGTSPVLNTPLLLIQVTRLKCGGYIFALRLNHTMSDAAGLVQFMSALGEVARGAHEPSIPPVWNRELLNAREPPRVTCTHREYDEVPDTKGTIIPLDDMVHRSFFFGPNEVASIRTQIPYHLRQSSDFEIITAFLWRCRTMALQPDDDEEVRIICIVNARAKFNPPLPAGYYGNAFAFPVAVTTARKLCQNPLGYALELVKKAKGDVTKEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGDVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAHGQEGLVIPVCLPGEAMKRFVKELDSLLKNYSQNPRLFVTSSL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3308g00006 483 Gene3D - 38 246 IPR023213 -
Pral3308g00006 483 Pfam Transferase family 42 464 - -
Pral3308g00006 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 46 464 - -
Pral3308g00006 483 Gene3D - 247 464 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3308g00006 Pral-Chr3308 425598 429269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3308g00006 46 464 Monolignol Biosynthesis Gene Families AT5G48930 29.062 1.19e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3308g00006 K19861 - gmx:100797017 743.421