Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00049 ATGGGATTATGCAAGGCATCTAAGGTTGACCAAAATATTGAGGCCTTCATTAGAAATCATGGTCCCTTAGCTCTCACAAGATATAAATTTGCAGGTGTCAAGAAAATGACCAACTCTTTCAAAGATAAATTGGGACAAGGTGGTTATGATTCTGTATACAAAGGAAAACTACCCAATGGCTATCCAGTTGCTGTAAAGTTATTGAAGGCATCAAAAGAGAATGGAGAAGACTTTATCAATGACGTTGCCAGCATCAGTAGGACTTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTTGAAGGCAAACAAAAGGTTCTCATATATGAATTTATGTCCAATGGATCTCTTGACAAGTTTATTCACAACAATGCAAATAAGAATAGTCTATGCTTGACTTGGGAAAATTTGTATCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCATAGAGGATGCAACACTCGAATTCTACATTTGGATATAAAGCCACATAACATCCTTTTAGATGAAATTTTTTGTCCCAAGATCTTAGATTTTGGTCTTGCTAAGCTTTGTCCAAAAAATGAAAGCATCGTTTCAATTTCAAAAGCGAGAGGAACTATAGGTTATCTTGCTTTGGAGGTTTGGAATAGAAACATAGGTGGAGTTTCGCATAAGTCTGATGTTTATAGTTATGGGATGATGCTCTTAGATATGGTTGGAGGGAAAAAGAACATGAATTTTGAGATCAATTGTTCAACTGATAAATATTTTCCAGATTATATTTATGTTCAATTTGAGCAAGGGAGCAGTTGGGGATGTAATGGAGACAATAATGTGGAGGAAAATGATATTGCAAAGATAATGACCATTGTGGGTTTGTGGTCTATACAAACATTTCCAAGTCAAAGACCTACAATGAGTAGAATGATCGAAATGTTAGAAAGAAGGCTTGAGCTGTTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCACTAAGATTAGAACTAGAATCTTCCACCACTGCTACTTCGACAATAGAGATTTTGGGTTTTCAAAGCTCTCCCCACAAGCTGCTAGAGGAACACTAG 1083 0.3693 MGLCKASKVDQNIEAFIRNHGPLALTRYKFAGVKKMTNSFKDKLGQGGYDSVYKGKLPNGYPVAVKLLKASKENGEDFINDVASISRTSHVNVVTLLGFCFEGKQKVLIYEFMSNGSLDKFIHNNANKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHLDIKPHNILLDEIFCPKILDFGLAKLCPKNESIVSISKARGTIGYLALEVWNRNIGGVSHKSDVYSYGMMLLDMVGGKKNMNFEINCSTDKYFPDYIYVQFEQGSSWGCNGDNNVEENDIAKIMTIVGLWSIQTFPSQRPTMSRMIEMLERRLELLEMPPKPVMPSPLRLELESSTTATSTIEILGFQSSPHKLLEEH 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00049 360 Gene3D Phosphorylase Kinase; domain 1 5 112 - -
Pral3301g00049 360 Gene3D Transferase(Phosphotransferase) domain 1 113 319 - -
Pral3301g00049 360 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 333 IPR045874 GO:0004672
Pral3301g00049 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Pral3301g00049 360 Pfam Protein tyrosine and serine/threonine kinase 40 311 IPR001245 GO:0004672|GO:0006468
Pral3301g00049 360 SMART serkin_6 38 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3301g00049 360 FunFam PR5-like receptor kinase 113 323 - -
Pral3301g00049 360 SUPERFAMILY Protein kinase-like (PK-like) 25 312 IPR011009 -
Pral3301g00049 360 ProSiteProfiles Protein kinase domain profile. 38 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00049 Pral-Chr3301 429377 430459 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00049 10 343 Receptor kinase-like Gene Family AT4G18250 53.353 3.64e-118 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3301g00049 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00049 - - pcin:129304394 495.352